Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSF1P09603 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CSF1P09603 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSF1P09603 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSF1P09603 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSF1P09603 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSF1P09603 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSF1P09603 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
CSF1P09603 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CSF1P09603 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSF1P09603 RCC2P6-201ENST00000526625 1557 ntBASIC15.85■□□□□ 0.13
CSF1P09603 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSF1P09603 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.85■□□□□ 0.13
CSF1P09603 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.85■□□□□ 0.13
CSF1P09603 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.85■□□□□ 0.13
CSF1P09603 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.85■□□□□ 0.13
CSF1P09603 MIR1224-201ENST00000408193 85 ntBASIC15.85■□□□□ 0.13
CSF1P09603 AC211429.1-201ENST00000415277 523 ntBASIC15.85■□□□□ 0.13
CSF1P09603 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CSF1P09603 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.85■□□□□ 0.13
CSF1P09603 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.85■□□□□ 0.13
CSF1P09603 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.85■□□□□ 0.13
CSF1P09603 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.85■□□□□ 0.13
CSF1P09603 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
CSF1P09603 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSF1P09603 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSF1P09603 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CSF1P09603 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSF1P09603 KRT17P2-201ENST00000300992 1314 ntBASIC15.85■□□□□ 0.13
CSF1P09603 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CSF1P09603 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSF1P09603 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.85■□□□□ 0.13
CSF1P09603 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSF1P09603 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSF1P09603 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.85■□□□□ 0.13
CSF1P09603 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSF1P09603 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSF1P09603 AC124283.5-201ENST00000624661 1809 ntBASIC15.84■□□□□ 0.13
CSF1P09603 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSF1P09603 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.84■□□□□ 0.13
CSF1P09603 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSF1P09603 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
CSF1P09603 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSF1P09603 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.84■□□□□ 0.13
CSF1P09603 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSF1P09603 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CSF1P09603 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSF1P09603 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSF1P09603 AC124067.4-201ENST00000519691 2379 ntBASIC15.84■□□□□ 0.13
CSF1P09603 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSF1P09603 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSF1P09603 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSF1P09603 AC141586.5-201ENST00000624546 2050 ntBASIC15.84■□□□□ 0.13
CSF1P09603 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
CSF1P09603 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSF1P09603 FAM210CP-201ENST00000445714 574 ntBASIC15.84■□□□□ 0.13
CSF1P09603 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC15.84■□□□□ 0.13
CSF1P09603 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSF1P09603 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.84■□□□□ 0.13
CSF1P09603 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CSF1P09603 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSF1P09603 AP001412.1-201ENST00000608405 714 ntBASIC15.84■□□□□ 0.13
CSF1P09603 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CSF1P09603 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.84■□□□□ 0.13
CSF1P09603 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.84■□□□□ 0.13
CSF1P09603 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSF1P09603 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSF1P09603 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSF1P09603 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSF1P09603 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.84■□□□□ 0.13
CSF1P09603 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSF1P09603 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.84■□□□□ 0.13
CSF1P09603 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CSF1P09603 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CSF1P09603 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
CSF1P09603 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CSF1P09603 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CSF1P09603 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CSF1P09603 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CSF1P09603 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CSF1P09603 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CSF1P09603 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CSF1P09603 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.13
CSF1P09603 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSF1P09603 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
CSF1P09603 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CSF1P09603 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSF1P09603 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSF1P09603 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
CSF1P09603 AC012618.2-201ENST00000428058 849 ntBASIC15.83■□□□□ 0.12
CSF1P09603 TSPY23P-201ENST00000440136 739 ntBASIC15.83■□□□□ 0.12
CSF1P09603 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.83■□□□□ 0.12
CSF1P09603 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CSF1P09603 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.83■□□□□ 0.12
CSF1P09603 AC068587.9-201ENST00000641814 219 ntBASIC15.83■□□□□ 0.12
CSF1P09603 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSF1P09603 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSF1P09603 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSF1P09603 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.83■□□□□ 0.12
CSF1P09603 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms