Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.32■□□□□ 0.36
CTSBP07858 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSBP07858 DRAXINP1-201ENST00000437611 948 ntBASIC17.32■□□□□ 0.36
CTSBP07858 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.32■□□□□ 0.36
CTSBP07858 AP000867.3-201ENST00000524675 377 ntBASIC17.32■□□□□ 0.36
CTSBP07858 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.32■□□□□ 0.36
CTSBP07858 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.32■□□□□ 0.36
CTSBP07858 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CTSBP07858 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CTSBP07858 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSBP07858 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSBP07858 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSBP07858 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.32■□□□□ 0.36
CTSBP07858 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSBP07858 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.32■□□□□ 0.36
CTSBP07858 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CTSBP07858 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSBP07858 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSBP07858 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
CTSBP07858 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTSBP07858 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSBP07858 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSBP07858 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSBP07858 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSBP07858 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSBP07858 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSBP07858 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSBP07858 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSBP07858 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSBP07858 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSBP07858 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.31■□□□□ 0.36
CTSBP07858 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSBP07858 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTSBP07858 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSBP07858 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.31■□□□□ 0.36
CTSBP07858 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTSBP07858 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSBP07858 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.31■□□□□ 0.36
CTSBP07858 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTSBP07858 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSBP07858 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CTSBP07858 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSBP07858 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSBP07858 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.31■□□□□ 0.36
CTSBP07858 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSBP07858 AC073592.3-201ENST00000625118 1834 ntBASIC17.31■□□□□ 0.36
CTSBP07858 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CTSBP07858 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSBP07858 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.3■□□□□ 0.36
CTSBP07858 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CTSBP07858 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSBP07858 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSBP07858 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.3■□□□□ 0.36
CTSBP07858 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSBP07858 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CTSBP07858 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CTSBP07858 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSBP07858 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
CTSBP07858 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSBP07858 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.3■□□□□ 0.36
CTSBP07858 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.3■□□□□ 0.36
CTSBP07858 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSBP07858 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.3■□□□□ 0.36
CTSBP07858 KRT126P-201ENST00000549467 1181 ntBASIC17.3■□□□□ 0.36
CTSBP07858 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.3■□□□□ 0.36
CTSBP07858 AC090616.6-201ENST00000582640 721 ntBASIC17.3■□□□□ 0.36
CTSBP07858 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.3■□□□□ 0.36
CTSBP07858 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.3■□□□□ 0.36
CTSBP07858 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSBP07858 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSBP07858 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.3■□□□□ 0.36
CTSBP07858 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSBP07858 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSBP07858 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSBP07858 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.3■□□□□ 0.36
CTSBP07858 LINC00167-201ENST00000530583 1419 ntBASIC17.3■□□□□ 0.36
CTSBP07858 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSBP07858 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CTSBP07858 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CTSBP07858 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CTSBP07858 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTSBP07858 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSBP07858 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.29■□□□□ 0.36
CTSBP07858 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CTSBP07858 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSBP07858 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSBP07858 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSBP07858 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSBP07858 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSBP07858 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSBP07858 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSBP07858 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSBP07858 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.29■□□□□ 0.36
CTSBP07858 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.29■□□□□ 0.36
CTSBP07858 MIR3652-201ENST00000579335 131 ntBASIC17.29■□□□□ 0.36
CTSBP07858 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.29■□□□□ 0.36
CTSBP07858 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.29■□□□□ 0.36
CTSBP07858 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSBP07858 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSBP07858 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms