Protein–RNA interactions for Protein: P04179

SOD2, Superoxide dismutase [Mn], mitochondrial, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2P04179 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.27■□□□□ 0.68
SOD2P04179 AC148477.8-201ENST00000624298 468 ntBASIC19.27■□□□□ 0.68
SOD2P04179 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SOD2P04179 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SOD2P04179 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.27■□□□□ 0.68
SOD2P04179 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.27■□□□□ 0.68
SOD2P04179 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.27■□□□□ 0.68
SOD2P04179 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SOD2P04179 INTS4P1-201ENST00000438455 1935 ntBASIC19.27■□□□□ 0.67
SOD2P04179 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SOD2P04179 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
SOD2P04179 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SOD2P04179 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOD2P04179 AC125634.1-201ENST00000438758 1403 ntBASIC19.26■□□□□ 0.67
SOD2P04179 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOD2P04179 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.26■□□□□ 0.67
SOD2P04179 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOD2P04179 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SOD2P04179 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOD2P04179 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOD2P04179 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.26■□□□□ 0.67
SOD2P04179 AC018712.1-201ENST00000455767 687 ntBASIC19.26■□□□□ 0.67
SOD2P04179 FGFR3P6-201ENST00000457012 610 ntBASIC19.26■□□□□ 0.67
SOD2P04179 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.26■□□□□ 0.67
SOD2P04179 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.26■□□□□ 0.67
SOD2P04179 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.26■□□□□ 0.67
SOD2P04179 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SOD2P04179 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.26■□□□□ 0.67
SOD2P04179 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOD2P04179 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOD2P04179 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.26■□□□□ 0.67
SOD2P04179 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOD2P04179 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SOD2P04179 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SOD2P04179 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOD2P04179 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOD2P04179 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOD2P04179 AC116562.4-201ENST00000641316 2276 ntBASIC19.25■□□□□ 0.67
SOD2P04179 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOD2P04179 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOD2P04179 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOD2P04179 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SOD2P04179 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SOD2P04179 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOD2P04179 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SOD2P04179 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SOD2P04179 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SOD2P04179 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.25■□□□□ 0.67
SOD2P04179 KRT18P65-201ENST00000439811 1286 ntBASIC19.25■□□□□ 0.67
SOD2P04179 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SOD2P04179 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SOD2P04179 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.25■□□□□ 0.67
SOD2P04179 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.25■□□□□ 0.67
SOD2P04179 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.25■□□□□ 0.67
SOD2P04179 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.25■□□□□ 0.67
SOD2P04179 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.25■□□□□ 0.67
SOD2P04179 AC011467.2-201ENST00000598425 242 ntBASIC19.25■□□□□ 0.67
SOD2P04179 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.25■□□□□ 0.67
SOD2P04179 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.25■□□□□ 0.67
SOD2P04179 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.25■□□□□ 0.67
SOD2P04179 AF228730.7-201ENST00000641842 219 ntBASIC19.25■□□□□ 0.67
SOD2P04179 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.25■□□□□ 0.67
SOD2P04179 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SOD2P04179 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOD2P04179 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOD2P04179 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
SOD2P04179 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOD2P04179 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SOD2P04179 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOD2P04179 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.24■□□□□ 0.67
SOD2P04179 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOD2P04179 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SOD2P04179 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SOD2P04179 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SOD2P04179 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOD2P04179 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
SOD2P04179 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.24■□□□□ 0.67
SOD2P04179 AC093909.1-201ENST00000504731 1122 ntBASIC19.24■□□□□ 0.67
SOD2P04179 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.24■□□□□ 0.67
SOD2P04179 AC073648.2-201ENST00000510116 352 ntBASIC19.24■□□□□ 0.67
SOD2P04179 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SOD2P04179 MTDHP3-201ENST00000594186 672 ntBASIC19.24■□□□□ 0.67
SOD2P04179 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SOD2P04179 AP001269.4-201ENST00000609611 512 ntBASIC19.24■□□□□ 0.67
SOD2P04179 GPALPP1-207ENST00000611650 899 ntBASIC19.24■□□□□ 0.67
SOD2P04179 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOD2P04179 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SOD2P04179 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SOD2P04179 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOD2P04179 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOD2P04179 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SOD2P04179 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SOD2P04179 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SOD2P04179 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.23■□□□□ 0.67
SOD2P04179 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOD2P04179 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOD2P04179 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
SOD2P04179 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SOD2P04179 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.23■□□□□ 0.67
SOD2P04179 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms