Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CHRNA1P02708 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CHRNA1P02708 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA1P02708 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.88■□□□□ 0.77
CHRNA1P02708 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA1P02708 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA1P02708 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA1P02708 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA1P02708 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA1P02708 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.88■□□□□ 0.77
CHRNA1P02708 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA1P02708 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA1P02708 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA1P02708 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.88■□□□□ 0.77
CHRNA1P02708 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.88■□□□□ 0.77
CHRNA1P02708 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA1P02708 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.88■□□□□ 0.77
CHRNA1P02708 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CHRNA1P02708 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.88■□□□□ 0.77
CHRNA1P02708 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.88■□□□□ 0.77
CHRNA1P02708 AL138831.2-201ENST00000606564 490 ntBASIC19.88■□□□□ 0.77
CHRNA1P02708 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA1P02708 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA1P02708 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.88■□□□□ 0.77
CHRNA1P02708 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA1P02708 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA1P02708 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA1P02708 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA1P02708 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.87■□□□□ 0.77
CHRNA1P02708 AC005082.1-201ENST00000413042 2259 ntBASIC19.87■□□□□ 0.77
CHRNA1P02708 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.87■□□□□ 0.77
CHRNA1P02708 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA1P02708 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA1P02708 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CHRNA1P02708 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CHRNA1P02708 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA1P02708 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA1P02708 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CHRNA1P02708 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.87■□□□□ 0.77
CHRNA1P02708 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA1P02708 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.87■□□□□ 0.77
CHRNA1P02708 AF186996.4-201ENST00000467186 377 ntBASIC19.87■□□□□ 0.77
CHRNA1P02708 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.87■□□□□ 0.77
CHRNA1P02708 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.87■□□□□ 0.77
CHRNA1P02708 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.87■□□□□ 0.77
CHRNA1P02708 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.87■□□□□ 0.77
CHRNA1P02708 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CHRNA1P02708 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.87■□□□□ 0.77
CHRNA1P02708 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.87■□□□□ 0.77
CHRNA1P02708 AL355877.3-201ENST00000622820 899 ntBASIC19.87■□□□□ 0.77
CHRNA1P02708 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA1P02708 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA1P02708 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA1P02708 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA1P02708 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.87■□□□□ 0.77
CHRNA1P02708 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA1P02708 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
CHRNA1P02708 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.87■□□□□ 0.77
CHRNA1P02708 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA1P02708 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.87■□□□□ 0.77
CHRNA1P02708 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA1P02708 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.87■□□□□ 0.77
CHRNA1P02708 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
CHRNA1P02708 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHRNA1P02708 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA1P02708 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA1P02708 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA1P02708 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA1P02708 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.86■□□□□ 0.77
CHRNA1P02708 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHRNA1P02708 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA1P02708 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA1P02708 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA1P02708 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19.86■□□□□ 0.77
CHRNA1P02708 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
CHRNA1P02708 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA1P02708 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CHRNA1P02708 FGFR3P6-201ENST00000457012 610 ntBASIC19.86■□□□□ 0.77
CHRNA1P02708 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.86■□□□□ 0.77
CHRNA1P02708 SLC25A1P1-201ENST00000528351 927 ntBASIC19.86■□□□□ 0.77
CHRNA1P02708 AC009533.2-201ENST00000543664 586 ntBASIC19.86■□□□□ 0.77
CHRNA1P02708 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.86■□□□□ 0.77
CHRNA1P02708 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.86■□□□□ 0.77
CHRNA1P02708 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.86■□□□□ 0.77
CHRNA1P02708 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.86■□□□□ 0.77
CHRNA1P02708 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA1P02708 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA1P02708 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA1P02708 INTS4P1-201ENST00000438455 1935 ntBASIC19.86■□□□□ 0.77
CHRNA1P02708 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA1P02708 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CHRNA1P02708 AC125634.1-201ENST00000438758 1403 ntBASIC19.85■□□□□ 0.77
CHRNA1P02708 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CHRNA1P02708 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA1P02708 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA1P02708 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.85■□□□□ 0.77
CHRNA1P02708 MIR574-201ENST00000385209 96 ntBASIC19.85■□□□□ 0.77
CHRNA1P02708 AC018712.1-201ENST00000455767 687 ntBASIC19.85■□□□□ 0.77
CHRNA1P02708 RNPS1P1-201ENST00000507437 918 ntBASIC19.85■□□□□ 0.77
CHRNA1P02708 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms