Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.2■□□□□ 0.82
CD4P01730 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.2■□□□□ 0.82
CD4P01730 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CD4P01730 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.2■□□□□ 0.82
CD4P01730 AL163051.1-201ENST00000569214 1512 ntBASIC20.2■□□□□ 0.82
CD4P01730 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD4P01730 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.2■□□□□ 0.82
CD4P01730 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CD4P01730 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.19■□□□□ 0.82
CD4P01730 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD4P01730 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CD4P01730 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.19■□□□□ 0.82
CD4P01730 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.19■□□□□ 0.82
CD4P01730 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD4P01730 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CD4P01730 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD4P01730 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD4P01730 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD4P01730 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.19■□□□□ 0.82
CD4P01730 BX842568.4-201ENST00000421222 227 ntBASIC20.19■□□□□ 0.82
CD4P01730 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.19■□□□□ 0.82
CD4P01730 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.19■□□□□ 0.82
CD4P01730 AC113404.2-201ENST00000507884 177 ntBASIC20.19■□□□□ 0.82
CD4P01730 AC073648.2-201ENST00000510116 352 ntBASIC20.19■□□□□ 0.82
CD4P01730 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.19■□□□□ 0.82
CD4P01730 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.19■□□□□ 0.82
CD4P01730 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.19■□□□□ 0.82
CD4P01730 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD4P01730 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD4P01730 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.19■□□□□ 0.82
CD4P01730 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD4P01730 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.19■□□□□ 0.82
CD4P01730 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD4P01730 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CD4P01730 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CD4P01730 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CD4P01730 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD4P01730 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD4P01730 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD4P01730 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CD4P01730 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD4P01730 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD4P01730 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD4P01730 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD4P01730 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD4P01730 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD4P01730 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD4P01730 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.18■□□□□ 0.82
CD4P01730 RBM17P3-201ENST00000417687 1192 ntBASIC20.18■□□□□ 0.82
CD4P01730 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.18■□□□□ 0.82
CD4P01730 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.18■□□□□ 0.82
CD4P01730 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.18■□□□□ 0.82
CD4P01730 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD4P01730 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD4P01730 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.18■□□□□ 0.82
CD4P01730 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
CD4P01730 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD4P01730 AC116407.3-201ENST00000623905 1129 ntBASIC20.18■□□□□ 0.82
CD4P01730 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD4P01730 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CD4P01730 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.18■□□□□ 0.82
CD4P01730 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD4P01730 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.18■□□□□ 0.82
CD4P01730 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.18■□□□□ 0.82
CD4P01730 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.18■□□□□ 0.82
CD4P01730 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CD4P01730 TP73-AS1-210ENST00000637775 1455 ntBASIC20.18■□□□□ 0.82
CD4P01730 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CD4P01730 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
CD4P01730 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CD4P01730 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.17■□□□□ 0.82
CD4P01730 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD4P01730 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.17■□□□□ 0.82
CD4P01730 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CD4P01730 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD4P01730 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD4P01730 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.17■□□□□ 0.82
CD4P01730 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CD4P01730 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.17■□□□□ 0.82
CD4P01730 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
CD4P01730 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.17■□□□□ 0.82
CD4P01730 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.17■□□□□ 0.82
CD4P01730 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.17■□□□□ 0.82
CD4P01730 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.17■□□□□ 0.82
CD4P01730 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CD4P01730 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD4P01730 ZNF259P1-201ENST00000407656 1365 ntBASIC20.17■□□□□ 0.82
CD4P01730 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.17■□□□□ 0.82
CD4P01730 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CD4P01730 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CD4P01730 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD4P01730 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CD4P01730 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CD4P01730 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.17■□□□□ 0.82
CD4P01730 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CD4P01730 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CD4P01730 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD4P01730 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CD4P01730 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CD4P01730 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms