Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPTM1O96005 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPTM1O96005 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPTM1O96005 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLPTM1O96005 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPTM1O96005 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.3■□□□□ 0.36
CLPTM1O96005 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC17.3■□□□□ 0.36
CLPTM1O96005 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CLPTM1O96005 AC060766.5-201ENST00000590539 871 ntBASIC17.3■□□□□ 0.36
CLPTM1O96005 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPTM1O96005 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CLPTM1O96005 AC092368.3-202ENST00000574180 1591 ntBASIC17.3■□□□□ 0.36
CLPTM1O96005 AP001094.4-201ENST00000579008 2176 ntBASIC17.3■□□□□ 0.36
CLPTM1O96005 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLPTM1O96005 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPTM1O96005 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPTM1O96005 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPTM1O96005 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPTM1O96005 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLPTM1O96005 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.3■□□□□ 0.36
CLPTM1O96005 UBALD1-205ENST00000590891 2641 ntBASIC17.3■□□□□ 0.36
CLPTM1O96005 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLPTM1O96005 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLPTM1O96005 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.3■□□□□ 0.36
CLPTM1O96005 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLPTM1O96005 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CLPTM1O96005 PCDH8P1-201ENST00000428983 2773 ntBASIC17.29■□□□□ 0.36
CLPTM1O96005 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CLPTM1O96005 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.29■□□□□ 0.36
CLPTM1O96005 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CLPTM1O96005 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.29■□□□□ 0.36
CLPTM1O96005 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.29■□□□□ 0.36
CLPTM1O96005 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.29■□□□□ 0.36
CLPTM1O96005 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.29■□□□□ 0.36
CLPTM1O96005 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.29■□□□□ 0.36
CLPTM1O96005 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLPTM1O96005 TSPY20P-201ENST00000450910 630 ntBASIC17.29■□□□□ 0.36
CLPTM1O96005 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.29■□□□□ 0.36
CLPTM1O96005 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.29■□□□□ 0.36
CLPTM1O96005 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLPTM1O96005 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.29■□□□□ 0.36
CLPTM1O96005 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CLPTM1O96005 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
CLPTM1O96005 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.29■□□□□ 0.36
CLPTM1O96005 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLPTM1O96005 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLPTM1O96005 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLPTM1O96005 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPTM1O96005 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPTM1O96005 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLPTM1O96005 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLPTM1O96005 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPTM1O96005 AC104417.2-201ENST00000562989 1793 ntBASIC17.28■□□□□ 0.36
CLPTM1O96005 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLPTM1O96005 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPTM1O96005 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CLPTM1O96005 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPTM1O96005 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPTM1O96005 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPTM1O96005 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLPTM1O96005 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CLPTM1O96005 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLPTM1O96005 PNMA6B-201ENST00000538162 1200 ntBASIC17.28■□□□□ 0.36
CLPTM1O96005 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPTM1O96005 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPTM1O96005 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLPTM1O96005 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.28■□□□□ 0.36
CLPTM1O96005 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.28■□□□□ 0.36
CLPTM1O96005 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLPTM1O96005 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.28■□□□□ 0.36
CLPTM1O96005 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.28■□□□□ 0.36
CLPTM1O96005 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.28■□□□□ 0.36
CLPTM1O96005 AL121761.2-201ENST00000598007 1648 ntBASIC17.28■□□□□ 0.36
CLPTM1O96005 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.28■□□□□ 0.36
CLPTM1O96005 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1O96005 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1O96005 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1O96005 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.27■□□□□ 0.36
CLPTM1O96005 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1O96005 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1O96005 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1O96005 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms