Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC27.34■■□□□ 1.97
RAPGEF3O95398 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC27.34■■□□□ 1.97
RAPGEF3O95398 AC006557.2-201ENST00000592985 1240 ntBASIC27.34■■□□□ 1.97
RAPGEF3O95398 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
RAPGEF3O95398 ASL-204ENST00000395331 1538 ntTSL 5 BASIC27.34■■□□□ 1.97
RAPGEF3O95398 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
RAPGEF3O95398 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RAPGEF3O95398 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RAPGEF3O95398 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
RAPGEF3O95398 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RAPGEF3O95398 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
RAPGEF3O95398 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RAPGEF3O95398 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
RAPGEF3O95398 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RAPGEF3O95398 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RAPGEF3O95398 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC27.33■■□□□ 1.97
RAPGEF3O95398 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC27.33■■□□□ 1.97
RAPGEF3O95398 CEND1P1-201ENST00000451006 455 ntBASIC27.33■■□□□ 1.97
RAPGEF3O95398 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC27.33■■□□□ 1.97
RAPGEF3O95398 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC27.33■■□□□ 1.97
RAPGEF3O95398 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
RAPGEF3O95398 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC27.33■■□□□ 1.96
RAPGEF3O95398 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RAPGEF3O95398 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RAPGEF3O95398 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
RAPGEF3O95398 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
RAPGEF3O95398 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RAPGEF3O95398 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC27.32■■□□□ 1.96
RAPGEF3O95398 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC27.32■■□□□ 1.96
RAPGEF3O95398 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC27.32■■□□□ 1.96
RAPGEF3O95398 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RAPGEF3O95398 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
RAPGEF3O95398 AL031432.2-201ENST00000566714 459 ntBASIC27.32■■□□□ 1.96
RAPGEF3O95398 AL928711.1-201ENST00000570165 459 ntBASIC27.32■■□□□ 1.96
RAPGEF3O95398 TCAP-202ENST00000578283 583 ntTSL 5 BASIC27.32■■□□□ 1.96
RAPGEF3O95398 SDHAP2-201ENST00000455183 2001 ntBASIC27.32■■□□□ 1.96
RAPGEF3O95398 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC27.32■■□□□ 1.96
RAPGEF3O95398 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC27.32■■□□□ 1.96
RAPGEF3O95398 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RAPGEF3O95398 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
RAPGEF3O95398 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RAPGEF3O95398 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RAPGEF3O95398 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RAPGEF3O95398 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
RAPGEF3O95398 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
RAPGEF3O95398 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC27.31■■□□□ 1.96
RAPGEF3O95398 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
RAPGEF3O95398 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RAPGEF3O95398 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC27.31■■□□□ 1.96
RAPGEF3O95398 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC27.31■■□□□ 1.96
RAPGEF3O95398 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
RAPGEF3O95398 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC27.31■■□□□ 1.96
RAPGEF3O95398 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC27.31■■□□□ 1.96
RAPGEF3O95398 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
RAPGEF3O95398 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RAPGEF3O95398 GPR89P-201ENST00000407924 1495 ntBASIC27.31■■□□□ 1.96
RAPGEF3O95398 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RAPGEF3O95398 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RAPGEF3O95398 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RAPGEF3O95398 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
RAPGEF3O95398 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
RAPGEF3O95398 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RAPGEF3O95398 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC27.3■■□□□ 1.96
RAPGEF3O95398 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC27.3■■□□□ 1.96
RAPGEF3O95398 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC27.3■■□□□ 1.96
RAPGEF3O95398 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC27.3■■□□□ 1.96
RAPGEF3O95398 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC27.3■■□□□ 1.96
RAPGEF3O95398 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC27.3■■□□□ 1.96
RAPGEF3O95398 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RAPGEF3O95398 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC27.3■■□□□ 1.96
RAPGEF3O95398 METTL23-205ENST00000588302 925 ntTSL 5 BASIC27.3■■□□□ 1.96
RAPGEF3O95398 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC27.3■■□□□ 1.96
RAPGEF3O95398 AC073592.4-201ENST00000623827 446 ntBASIC27.3■■□□□ 1.96
RAPGEF3O95398 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC27.3■■□□□ 1.96
RAPGEF3O95398 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RAPGEF3O95398 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC27.3■■□□□ 1.96
RAPGEF3O95398 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RAPGEF3O95398 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
RAPGEF3O95398 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RAPGEF3O95398 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RAPGEF3O95398 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
RAPGEF3O95398 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC27.29■■□□□ 1.96
RAPGEF3O95398 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RAPGEF3O95398 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC27.29■■□□□ 1.96
RAPGEF3O95398 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
RAPGEF3O95398 MED29-202ENST00000594368 1471 ntTSL 2 BASIC27.29■■□□□ 1.96
RAPGEF3O95398 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RAPGEF3O95398 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RAPGEF3O95398 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
RAPGEF3O95398 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC27.28■■□□□ 1.96
RAPGEF3O95398 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC27.28■■□□□ 1.96
RAPGEF3O95398 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC27.28■■□□□ 1.96
RAPGEF3O95398 PUS1-205ENST00000535067 838 ntTSL 3 BASIC27.28■■□□□ 1.96
RAPGEF3O95398 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC27.28■■□□□ 1.96
RAPGEF3O95398 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC27.28■■□□□ 1.96
RAPGEF3O95398 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC27.28■■□□□ 1.96
RAPGEF3O95398 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC27.28■■□□□ 1.96
RAPGEF3O95398 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RAPGEF3O95398 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RAPGEF3O95398 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms