Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TRAF3IP2O43734 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TRAF3IP2O43734 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
TRAF3IP2O43734 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAF3IP2O43734 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAF3IP2O43734 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.33■□□□□ 0.21
TRAF3IP2O43734 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
TRAF3IP2O43734 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAF3IP2O43734 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TRAF3IP2O43734 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 AL157888.1-201ENST00000631930 593 ntBASIC16.33■□□□□ 0.2
TRAF3IP2O43734 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 AC020763.4-201ENST00000623414 4170 ntBASIC16.33■□□□□ 0.2
TRAF3IP2O43734 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRAF3IP2O43734 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 AC117947.1-201ENST00000427448 529 ntBASIC16.32■□□□□ 0.2
TRAF3IP2O43734 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 YBX1P2-201ENST00000489612 999 ntBASIC16.32■□□□□ 0.2
TRAF3IP2O43734 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 AL024508.2-201ENST00000607749 1894 ntBASIC16.32■□□□□ 0.2
TRAF3IP2O43734 AC139887.4-201ENST00000607877 719 ntBASIC16.32■□□□□ 0.2
TRAF3IP2O43734 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 AL031432.5-201ENST00000641059 760 ntBASIC16.32■□□□□ 0.2
TRAF3IP2O43734 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRAF3IP2O43734 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.31■□□□□ 0.2
TRAF3IP2O43734 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.31■□□□□ 0.2
TRAF3IP2O43734 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms