Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.41■□□□□ 0.38
PROM1O43490 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PROM1O43490 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.41■□□□□ 0.38
PROM1O43490 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.41■□□□□ 0.38
PROM1O43490 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.41■□□□□ 0.38
PROM1O43490 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PROM1O43490 SDHAP2-201ENST00000455183 2001 ntBASIC17.41■□□□□ 0.38
PROM1O43490 AC009102.3-201ENST00000623118 1491 ntBASIC17.41■□□□□ 0.38
PROM1O43490 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PROM1O43490 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PROM1O43490 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PROM1O43490 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.41■□□□□ 0.38
PROM1O43490 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PROM1O43490 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.41■□□□□ 0.38
PROM1O43490 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PROM1O43490 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
PROM1O43490 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PROM1O43490 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
PROM1O43490 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.41■□□□□ 0.38
PROM1O43490 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.41■□□□□ 0.38
PROM1O43490 BICD1-207ENST00000551848 1962 ntBASIC17.4■□□□□ 0.38
PROM1O43490 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PROM1O43490 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PROM1O43490 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PROM1O43490 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PROM1O43490 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PROM1O43490 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PROM1O43490 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PROM1O43490 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.4■□□□□ 0.38
PROM1O43490 BX664615.1-201ENST00000443558 458 ntBASIC17.4■□□□□ 0.38
PROM1O43490 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.4■□□□□ 0.38
PROM1O43490 COX11P1-201ENST00000489116 835 ntBASIC17.4■□□□□ 0.38
PROM1O43490 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PROM1O43490 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PROM1O43490 AC009065.1-201ENST00000564055 1225 ntBASIC17.4■□□□□ 0.38
PROM1O43490 RN7SL850P-201ENST00000579959 291 ntBASIC17.4■□□□□ 0.38
PROM1O43490 AC140113.3-201ENST00000605663 199 ntBASIC17.4■□□□□ 0.38
PROM1O43490 AL031432.5-201ENST00000641059 760 ntBASIC17.4■□□□□ 0.38
PROM1O43490 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PROM1O43490 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PROM1O43490 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.4■□□□□ 0.38
PROM1O43490 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.4■□□□□ 0.38
PROM1O43490 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PROM1O43490 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PROM1O43490 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PROM1O43490 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.4■□□□□ 0.38
PROM1O43490 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
PROM1O43490 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PROM1O43490 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PROM1O43490 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.4■□□□□ 0.38
PROM1O43490 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.4■□□□□ 0.38
PROM1O43490 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.4■□□□□ 0.38
PROM1O43490 AC099343.3-201ENST00000605834 2503 ntBASIC17.4■□□□□ 0.38
PROM1O43490 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PROM1O43490 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
PROM1O43490 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PROM1O43490 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PROM1O43490 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PROM1O43490 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PROM1O43490 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PROM1O43490 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PROM1O43490 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.39■□□□□ 0.37
PROM1O43490 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.39■□□□□ 0.37
PROM1O43490 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.39■□□□□ 0.37
PROM1O43490 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PROM1O43490 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PROM1O43490 GCSHP2-201ENST00000560971 527 ntBASIC17.39■□□□□ 0.37
PROM1O43490 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.39■□□□□ 0.37
PROM1O43490 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PROM1O43490 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PROM1O43490 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PROM1O43490 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PROM1O43490 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PROM1O43490 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PROM1O43490 AC135050.7-201ENST00000624508 2218 ntBASIC17.39■□□□□ 0.37
PROM1O43490 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PROM1O43490 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.38■□□□□ 0.37
PROM1O43490 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PROM1O43490 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PROM1O43490 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.38■□□□□ 0.37
PROM1O43490 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PROM1O43490 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
PROM1O43490 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.38■□□□□ 0.37
PROM1O43490 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PROM1O43490 AL162741.1-201ENST00000565563 1558 ntBASIC17.38■□□□□ 0.37
PROM1O43490 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PROM1O43490 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PROM1O43490 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.38■□□□□ 0.37
PROM1O43490 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
PROM1O43490 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.38■□□□□ 0.37
PROM1O43490 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.38■□□□□ 0.37
PROM1O43490 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.38■□□□□ 0.37
PROM1O43490 AL023973.1-201ENST00000624619 620 ntBASIC17.38■□□□□ 0.37
PROM1O43490 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.38■□□□□ 0.37
PROM1O43490 AC092865.7-201ENST00000641832 219 ntBASIC17.38■□□□□ 0.37
PROM1O43490 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PROM1O43490 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PROM1O43490 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
PROM1O43490 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PROM1O43490 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms