Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
COCHO43405 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.89■□□□□ 0.61
COCHO43405 AC099336.1-202ENST00000602961 463 ntBASIC18.89■□□□□ 0.61
COCHO43405 AL353801.3-201ENST00000609898 542 ntBASIC18.89■□□□□ 0.61
COCHO43405 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COCHO43405 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.89■□□□□ 0.61
COCHO43405 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.89■□□□□ 0.61
COCHO43405 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.89■□□□□ 0.61
COCHO43405 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COCHO43405 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
COCHO43405 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.89■□□□□ 0.61
COCHO43405 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COCHO43405 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.89■□□□□ 0.61
COCHO43405 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
COCHO43405 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COCHO43405 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COCHO43405 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
COCHO43405 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COCHO43405 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.88■□□□□ 0.61
COCHO43405 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
COCHO43405 AC111152.3-201ENST00000569699 673 ntBASIC18.88■□□□□ 0.61
COCHO43405 RN7SL510P-201ENST00000581311 263 ntBASIC18.88■□□□□ 0.61
COCHO43405 AC138894.3-201ENST00000603787 634 ntBASIC18.88■□□□□ 0.61
COCHO43405 AL121772.3-201ENST00000610840 674 ntBASIC18.88■□□□□ 0.61
COCHO43405 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COCHO43405 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.88■□□□□ 0.61
COCHO43405 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COCHO43405 NSUN5P1-202ENST00000421140 1535 ntBASIC18.88■□□□□ 0.61
COCHO43405 NSUN5P2-203ENST00000457352 1529 ntBASIC18.88■□□□□ 0.61
COCHO43405 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COCHO43405 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COCHO43405 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COCHO43405 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
COCHO43405 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COCHO43405 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COCHO43405 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COCHO43405 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
COCHO43405 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COCHO43405 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.87■□□□□ 0.61
COCHO43405 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COCHO43405 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COCHO43405 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COCHO43405 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
COCHO43405 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.87■□□□□ 0.61
COCHO43405 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.87■□□□□ 0.61
COCHO43405 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COCHO43405 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.87■□□□□ 0.61
COCHO43405 GMCL1P1-201ENST00000463439 1581 ntBASIC18.87■□□□□ 0.61
COCHO43405 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.87■□□□□ 0.61
COCHO43405 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.87■□□□□ 0.61
COCHO43405 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
COCHO43405 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COCHO43405 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.87■□□□□ 0.61
COCHO43405 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.87■□□□□ 0.61
COCHO43405 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COCHO43405 AC018445.3-201ENST00000624177 1945 ntBASIC18.87■□□□□ 0.61
COCHO43405 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.87■□□□□ 0.61
COCHO43405 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COCHO43405 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
COCHO43405 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.86■□□□□ 0.61
COCHO43405 AC098818.2-201ENST00000564925 2320 ntBASIC18.86■□□□□ 0.61
COCHO43405 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COCHO43405 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
COCHO43405 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COCHO43405 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
COCHO43405 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.86■□□□□ 0.61
COCHO43405 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COCHO43405 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.86■□□□□ 0.61
COCHO43405 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COCHO43405 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
COCHO43405 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COCHO43405 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COCHO43405 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COCHO43405 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
COCHO43405 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.86■□□□□ 0.61
COCHO43405 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.86■□□□□ 0.61
COCHO43405 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.86■□□□□ 0.61
COCHO43405 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COCHO43405 AC068472.1-201ENST00000474589 881 ntBASIC18.86■□□□□ 0.61
COCHO43405 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
COCHO43405 KRT18P31-201ENST00000506277 1292 ntBASIC18.86■□□□□ 0.61
COCHO43405 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.86■□□□□ 0.61
COCHO43405 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.86■□□□□ 0.61
COCHO43405 AC091304.2-201ENST00000564639 760 ntBASIC18.86■□□□□ 0.61
COCHO43405 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.86■□□□□ 0.61
COCHO43405 IFNL4P1-201ENST00000607083 540 ntBASIC18.86■□□□□ 0.61
COCHO43405 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COCHO43405 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COCHO43405 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
COCHO43405 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.86■□□□□ 0.61
COCHO43405 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COCHO43405 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COCHO43405 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
COCHO43405 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COCHO43405 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
COCHO43405 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.86■□□□□ 0.61
COCHO43405 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
COCHO43405 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COCHO43405 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
COCHO43405 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms