Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.19■□□□□ 0.34
RRP8O43159 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RRP8O43159 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RRP8O43159 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.19■□□□□ 0.34
RRP8O43159 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RRP8O43159 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.19■□□□□ 0.34
RRP8O43159 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
RRP8O43159 AC092910.1-201ENST00000482027 1129 ntBASIC17.19■□□□□ 0.34
RRP8O43159 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.19■□□□□ 0.34
RRP8O43159 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.19■□□□□ 0.34
RRP8O43159 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
RRP8O43159 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RRP8O43159 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.19■□□□□ 0.34
RRP8O43159 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RRP8O43159 TCF3P1-201ENST00000423021 1937 ntBASIC17.19■□□□□ 0.34
RRP8O43159 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RRP8O43159 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RRP8O43159 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RRP8O43159 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RRP8O43159 TP73-AS1-210ENST00000637775 1455 ntBASIC17.18■□□□□ 0.34
RRP8O43159 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RRP8O43159 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.18■□□□□ 0.34
RRP8O43159 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RRP8O43159 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RRP8O43159 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RRP8O43159 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.18■□□□□ 0.34
RRP8O43159 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.18■□□□□ 0.34
RRP8O43159 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RRP8O43159 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RRP8O43159 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RRP8O43159 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.18■□□□□ 0.34
RRP8O43159 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.18■□□□□ 0.34
RRP8O43159 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.18■□□□□ 0.34
RRP8O43159 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.18■□□□□ 0.34
RRP8O43159 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RRP8O43159 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.18■□□□□ 0.34
RRP8O43159 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RRP8O43159 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RRP8O43159 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RRP8O43159 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RRP8O43159 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RRP8O43159 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RRP8O43159 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RRP8O43159 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RRP8O43159 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.17■□□□□ 0.34
RRP8O43159 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.17■□□□□ 0.34
RRP8O43159 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RRP8O43159 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RRP8O43159 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
RRP8O43159 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RRP8O43159 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RRP8O43159 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.17■□□□□ 0.34
RRP8O43159 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.17■□□□□ 0.34
RRP8O43159 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RRP8O43159 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
RRP8O43159 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.17■□□□□ 0.34
RRP8O43159 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.17■□□□□ 0.34
RRP8O43159 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.17■□□□□ 0.34
RRP8O43159 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.17■□□□□ 0.34
RRP8O43159 OR7E14P-202ENST00000530490 1290 ntBASIC17.17■□□□□ 0.34
RRP8O43159 AC034105.1-201ENST00000563488 319 ntBASIC17.17■□□□□ 0.34
RRP8O43159 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.17■□□□□ 0.34
RRP8O43159 AC002347.1-201ENST00000569543 541 ntBASIC17.17■□□□□ 0.34
RRP8O43159 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.17■□□□□ 0.34
RRP8O43159 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.17■□□□□ 0.34
RRP8O43159 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RRP8O43159 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RRP8O43159 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.17■□□□□ 0.34
RRP8O43159 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RRP8O43159 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RRP8O43159 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.17■□□□□ 0.34
RRP8O43159 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.17■□□□□ 0.34
RRP8O43159 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RRP8O43159 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RRP8O43159 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RRP8O43159 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RRP8O43159 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RRP8O43159 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RRP8O43159 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RRP8O43159 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RRP8O43159 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RRP8O43159 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.16■□□□□ 0.34
RRP8O43159 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
RRP8O43159 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RRP8O43159 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RRP8O43159 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RRP8O43159 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.16■□□□□ 0.34
RRP8O43159 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.16■□□□□ 0.34
RRP8O43159 AC009533.2-201ENST00000543664 586 ntBASIC17.16■□□□□ 0.34
RRP8O43159 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.16■□□□□ 0.34
RRP8O43159 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.16■□□□□ 0.34
RRP8O43159 AC008687.5-201ENST00000593746 558 ntBASIC17.16■□□□□ 0.34
RRP8O43159 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.16■□□□□ 0.34
RRP8O43159 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RRP8O43159 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RRP8O43159 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RRP8O43159 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RRP8O43159 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.16■□□□□ 0.34
RRP8O43159 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RRP8O43159 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms