Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.84■■□□□ 1.09
FOXN1O15353 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.84■■□□□ 1.09
FOXN1O15353 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC21.84■■□□□ 1.09
FOXN1O15353 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC21.84■■□□□ 1.09
FOXN1O15353 AL596442.2-201ENST00000610240 980 ntBASIC21.84■■□□□ 1.09
FOXN1O15353 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC21.84■■□□□ 1.09
FOXN1O15353 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN1O15353 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN1O15353 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN1O15353 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN1O15353 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN1O15353 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN1O15353 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
FOXN1O15353 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
FOXN1O15353 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
FOXN1O15353 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.84■■□□□ 1.09
FOXN1O15353 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
FOXN1O15353 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
FOXN1O15353 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
FOXN1O15353 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.83■■□□□ 1.09
FOXN1O15353 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
FOXN1O15353 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
FOXN1O15353 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
FOXN1O15353 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
FOXN1O15353 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
FOXN1O15353 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.83■■□□□ 1.09
FOXN1O15353 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.83■■□□□ 1.09
FOXN1O15353 CDV3-207ENST00000508481 661 ntTSL 3 BASIC21.83■■□□□ 1.09
FOXN1O15353 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC21.83■■□□□ 1.09
FOXN1O15353 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC21.83■■□□□ 1.09
FOXN1O15353 CD63-204ENST00000546939 779 ntTSL 3 BASIC21.83■■□□□ 1.09
FOXN1O15353 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.83■■□□□ 1.09
FOXN1O15353 AC034105.1-201ENST00000563488 319 ntBASIC21.83■■□□□ 1.09
FOXN1O15353 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.83■■□□□ 1.09
FOXN1O15353 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
FOXN1O15353 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
FOXN1O15353 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
FOXN1O15353 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
FOXN1O15353 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
FOXN1O15353 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.83■■□□□ 1.08
FOXN1O15353 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
FOXN1O15353 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.83■■□□□ 1.08
FOXN1O15353 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
FOXN1O15353 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
FOXN1O15353 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
FOXN1O15353 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
FOXN1O15353 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
FOXN1O15353 AL161938.1-201ENST00000569833 2180 ntBASIC21.82■■□□□ 1.08
FOXN1O15353 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXN1O15353 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.82■■□□□ 1.08
FOXN1O15353 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.82■■□□□ 1.08
FOXN1O15353 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
FOXN1O15353 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXN1O15353 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXN1O15353 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
FOXN1O15353 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
FOXN1O15353 SYS1-203ENST00000414310 795 ntTSL 3 BASIC21.82■■□□□ 1.08
FOXN1O15353 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21.82■■□□□ 1.08
FOXN1O15353 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
FOXN1O15353 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
FOXN1O15353 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.82■■□□□ 1.08
FOXN1O15353 AL592071.1-201ENST00000611956 408 ntBASIC21.82■■□□□ 1.08
FOXN1O15353 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.82■■□□□ 1.08
FOXN1O15353 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.82■■□□□ 1.08
FOXN1O15353 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.82■■□□□ 1.08
FOXN1O15353 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXN1O15353 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.82■■□□□ 1.08
FOXN1O15353 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
FOXN1O15353 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FOXN1O15353 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN1O15353 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN1O15353 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN1O15353 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN1O15353 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
FOXN1O15353 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.81■■□□□ 1.08
FOXN1O15353 ZNF815P-204ENST00000434898 1737 ntBASIC21.81■■□□□ 1.08
FOXN1O15353 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN1O15353 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
FOXN1O15353 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN1O15353 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
FOXN1O15353 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN1O15353 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.81■■□□□ 1.08
FOXN1O15353 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN1O15353 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.81■■□□□ 1.08
FOXN1O15353 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
FOXN1O15353 NME1-207ENST00000480143 964 ntTSL 2 BASIC21.81■■□□□ 1.08
FOXN1O15353 AC091607.1-201ENST00000490318 1060 ntBASIC21.81■■□□□ 1.08
FOXN1O15353 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.81■■□□□ 1.08
FOXN1O15353 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.81■■□□□ 1.08
FOXN1O15353 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN1O15353 MIR3917-201ENST00000580971 93 ntBASIC21.81■■□□□ 1.08
FOXN1O15353 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC21.81■■□□□ 1.08
FOXN1O15353 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.81■■□□□ 1.08
FOXN1O15353 AC011467.4-201ENST00000594891 528 ntBASIC21.81■■□□□ 1.08
FOXN1O15353 AL591684.3-201ENST00000605187 298 ntBASIC21.81■■□□□ 1.08
FOXN1O15353 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN1O15353 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN1O15353 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FOXN1O15353 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
FOXN1O15353 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms