Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MID1O15344 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
MID1O15344 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
MID1O15344 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MID1O15344 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MID1O15344 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MID1O15344 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
MID1O15344 FAAHP1-202ENST00000446499 1238 ntBASIC18.31■□□□□ 0.52
MID1O15344 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.31■□□□□ 0.52
MID1O15344 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.31■□□□□ 0.52
MID1O15344 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MID1O15344 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MID1O15344 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.31■□□□□ 0.52
MID1O15344 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.31■□□□□ 0.52
MID1O15344 AC008687.5-201ENST00000593746 558 ntBASIC18.31■□□□□ 0.52
MID1O15344 LINC01711-201ENST00000598340 967 ntBASIC18.31■□□□□ 0.52
MID1O15344 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.31■□□□□ 0.52
MID1O15344 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.31■□□□□ 0.52
MID1O15344 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MID1O15344 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.31■□□□□ 0.52
MID1O15344 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
MID1O15344 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MID1O15344 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
MID1O15344 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MID1O15344 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MID1O15344 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
MID1O15344 AC005082.1-201ENST00000413042 2259 ntBASIC18.3■□□□□ 0.52
MID1O15344 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.3■□□□□ 0.52
MID1O15344 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MID1O15344 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MID1O15344 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MID1O15344 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MID1O15344 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
MID1O15344 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MID1O15344 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MID1O15344 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MID1O15344 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.3■□□□□ 0.52
MID1O15344 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
MID1O15344 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.3■□□□□ 0.52
MID1O15344 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.3■□□□□ 0.52
MID1O15344 AC113404.2-201ENST00000507884 177 ntBASIC18.3■□□□□ 0.52
MID1O15344 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
MID1O15344 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
MID1O15344 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.3■□□□□ 0.52
MID1O15344 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.3■□□□□ 0.52
MID1O15344 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MID1O15344 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
MID1O15344 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
MID1O15344 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
MID1O15344 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MID1O15344 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.29■□□□□ 0.52
MID1O15344 ANO7L1-203ENST00000602586 1720 ntBASIC18.29■□□□□ 0.52
MID1O15344 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
MID1O15344 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MID1O15344 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
MID1O15344 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MID1O15344 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MID1O15344 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.29■□□□□ 0.52
MID1O15344 MINOS1P3-201ENST00000457048 203 ntBASIC18.29■□□□□ 0.52
MID1O15344 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.29■□□□□ 0.52
MID1O15344 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MID1O15344 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
MID1O15344 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.29■□□□□ 0.52
MID1O15344 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.29■□□□□ 0.52
MID1O15344 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MID1O15344 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
MID1O15344 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MID1O15344 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MID1O15344 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
MID1O15344 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
MID1O15344 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MID1O15344 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
MID1O15344 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MID1O15344 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MID1O15344 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MID1O15344 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MID1O15344 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
MID1O15344 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
MID1O15344 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
MID1O15344 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
MID1O15344 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
MID1O15344 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MID1O15344 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MID1O15344 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
MID1O15344 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.28■□□□□ 0.52
MID1O15344 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.28■□□□□ 0.52
MID1O15344 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
MID1O15344 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MID1O15344 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
MID1O15344 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
MID1O15344 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.28■□□□□ 0.52
MID1O15344 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
MID1O15344 NUS1P2-201ENST00000417358 873 ntBASIC18.28■□□□□ 0.52
MID1O15344 TSPY12P-201ENST00000421279 868 ntBASIC18.28■□□□□ 0.52
MID1O15344 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.28■□□□□ 0.52
MID1O15344 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.28■□□□□ 0.52
MID1O15344 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.28■□□□□ 0.52
MID1O15344 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.28■□□□□ 0.52
MID1O15344 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
MID1O15344 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms