Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPTLC1O15269 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.57■□□□□ 0.72
SPTLC1O15269 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.57■□□□□ 0.72
SPTLC1O15269 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.57■□□□□ 0.72
SPTLC1O15269 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.57■□□□□ 0.72
SPTLC1O15269 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.57■□□□□ 0.72
SPTLC1O15269 AC004263.2-201ENST00000617183 678 ntBASIC19.57■□□□□ 0.72
SPTLC1O15269 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.57■□□□□ 0.72
SPTLC1O15269 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPTLC1O15269 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
SPTLC1O15269 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SPTLC1O15269 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.57■□□□□ 0.72
SPTLC1O15269 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SPTLC1O15269 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC1O15269 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.56■□□□□ 0.72
SPTLC1O15269 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.56■□□□□ 0.72
SPTLC1O15269 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.56■□□□□ 0.72
SPTLC1O15269 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC1O15269 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC1O15269 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.56■□□□□ 0.72
SPTLC1O15269 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.56■□□□□ 0.72
SPTLC1O15269 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.56■□□□□ 0.72
SPTLC1O15269 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC1O15269 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.56■□□□□ 0.72
SPTLC1O15269 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SPTLC1O15269 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC1O15269 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.56■□□□□ 0.72
SPTLC1O15269 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.56■□□□□ 0.72
SPTLC1O15269 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
SPTLC1O15269 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.56■□□□□ 0.72
SPTLC1O15269 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC1O15269 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
SPTLC1O15269 AC012313.10-201ENST00000623509 926 ntBASIC19.56■□□□□ 0.72
SPTLC1O15269 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC1O15269 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.56■□□□□ 0.72
SPTLC1O15269 AC120498.9-201ENST00000339021 3867 ntBASIC19.56■□□□□ 0.72
SPTLC1O15269 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC1O15269 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.56■□□□□ 0.72
SPTLC1O15269 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC1O15269 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC1O15269 AL353692.3-201ENST00000407031 1396 ntBASIC19.56■□□□□ 0.72
SPTLC1O15269 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.56■□□□□ 0.72
SPTLC1O15269 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPTLC1O15269 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC1O15269 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.55■□□□□ 0.72
SPTLC1O15269 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC1O15269 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC1O15269 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC1O15269 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC1O15269 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC1O15269 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC1O15269 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
SPTLC1O15269 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC1O15269 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC1O15269 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC1O15269 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.55■□□□□ 0.72
SPTLC1O15269 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.55■□□□□ 0.72
SPTLC1O15269 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.55■□□□□ 0.72
SPTLC1O15269 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC1O15269 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC1O15269 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.55■□□□□ 0.72
SPTLC1O15269 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.55■□□□□ 0.72
SPTLC1O15269 AC092329.2-201ENST00000598402 547 ntBASIC19.55■□□□□ 0.72
SPTLC1O15269 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC1O15269 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.55■□□□□ 0.72
SPTLC1O15269 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.55■□□□□ 0.72
SPTLC1O15269 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.55■□□□□ 0.72
SPTLC1O15269 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.55■□□□□ 0.72
SPTLC1O15269 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC1O15269 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPTLC1O15269 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC1O15269 KRT18P1-202ENST00000452408 1331 ntBASIC19.54■□□□□ 0.72
SPTLC1O15269 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.54■□□□□ 0.72
SPTLC1O15269 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.54■□□□□ 0.72
SPTLC1O15269 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SPTLC1O15269 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC1O15269 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC1O15269 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC1O15269 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC1O15269 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC1O15269 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC1O15269 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC1O15269 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.54■□□□□ 0.72
SPTLC1O15269 AC246785.2-201ENST00000432512 513 ntBASIC19.54■□□□□ 0.72
SPTLC1O15269 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.54■□□□□ 0.72
SPTLC1O15269 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.54■□□□□ 0.72
SPTLC1O15269 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.54■□□□□ 0.72
SPTLC1O15269 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC1O15269 TPSP2-201ENST00000561760 610 ntBASIC19.54■□□□□ 0.72
SPTLC1O15269 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.54■□□□□ 0.72
SPTLC1O15269 GPALPP1-207ENST00000611650 899 ntBASIC19.54■□□□□ 0.72
SPTLC1O15269 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
SPTLC1O15269 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.54■□□□□ 0.72
SPTLC1O15269 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC1O15269 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC1O15269 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
SPTLC1O15269 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
SPTLC1O15269 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC1O15269 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SPTLC1O15269 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms