Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 AC007322.1-201ENST00000426983 750 ntBASIC12.93□□□□□ -0.34
LINC01546A6NGU7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 ABHD17AP6-201ENST00000458502 1044 ntBASIC12.93□□□□□ -0.34
LINC01546A6NGU7 Z85996.1-201ENST00000494644 937 ntBASIC12.93□□□□□ -0.34
LINC01546A6NGU7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01546A6NGU7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 AL139246.5-201ENST00000606645 996 ntBASIC12.92□□□□□ -0.34
LINC01546A6NGU7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
LINC01546A6NGU7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 AL603756.1-201ENST00000606511 2163 ntBASIC12.91□□□□□ -0.34
LINC01546A6NGU7 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 KRT8P50-201ENST00000562022 1438 ntBASIC12.91□□□□□ -0.34
LINC01546A6NGU7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 AC137761.2-201ENST00000561729 223 ntBASIC12.91□□□□□ -0.34
LINC01546A6NGU7 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 AC145350.3-201ENST00000569033 163 ntBASIC12.91□□□□□ -0.34
LINC01546A6NGU7 AC011767.1-201ENST00000617410 1153 ntBASIC12.91□□□□□ -0.34
LINC01546A6NGU7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 SDHAP2-201ENST00000455183 2001 ntBASIC12.91□□□□□ -0.34
LINC01546A6NGU7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.91□□□□□ -0.34
LINC01546A6NGU7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 FLJ38576-201ENST00000623820 2459 ntBASIC12.9□□□□□ -0.34
LINC01546A6NGU7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
LINC01546A6NGU7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms