Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CNOT1A5YKK6 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 AC007274.1-201ENST00000439805 662 ntBASIC17.43■□□□□ 0.38
CNOT1A5YKK6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.43■□□□□ 0.38
CNOT1A5YKK6 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 AC125634.1-201ENST00000438758 1403 ntBASIC17.43■□□□□ 0.38
CNOT1A5YKK6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 AC006557.2-201ENST00000592985 1240 ntBASIC17.43■□□□□ 0.38
CNOT1A5YKK6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CNOT1A5YKK6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.42■□□□□ 0.38
CNOT1A5YKK6 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 Z98044.1-201ENST00000632503 1764 ntBASIC17.42■□□□□ 0.38
CNOT1A5YKK6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 AC007375.3-201ENST00000600936 2314 ntBASIC17.42■□□□□ 0.38
CNOT1A5YKK6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.42■□□□□ 0.38
CNOT1A5YKK6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 AC099778.1-201ENST00000568593 1911 ntBASIC17.41■□□□□ 0.38
CNOT1A5YKK6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CNOT1A5YKK6 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 AC068472.1-201ENST00000474589 881 ntBASIC17.4■□□□□ 0.38
CNOT1A5YKK6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT1A5YKK6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms