Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYCE3A1L190 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SYCE3A1L190 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.88■□□□□ 0.93
SYCE3A1L190 AC097658.1-201ENST00000475555 843 ntBASIC20.88■□□□□ 0.93
SYCE3A1L190 AL162430.1-201ENST00000480705 870 ntBASIC20.88■□□□□ 0.93
SYCE3A1L190 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.88■□□□□ 0.93
SYCE3A1L190 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.88■□□□□ 0.93
SYCE3A1L190 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYCE3A1L190 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.88■□□□□ 0.93
SYCE3A1L190 AC022517.1-201ENST00000592429 346 ntBASIC20.88■□□□□ 0.93
SYCE3A1L190 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYCE3A1L190 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYCE3A1L190 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYCE3A1L190 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.88■□□□□ 0.93
SYCE3A1L190 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYCE3A1L190 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SYCE3A1L190 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYCE3A1L190 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYCE3A1L190 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SYCE3A1L190 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SYCE3A1L190 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
SYCE3A1L190 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.87■□□□□ 0.93
SYCE3A1L190 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
SYCE3A1L190 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SYCE3A1L190 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.87■□□□□ 0.93
SYCE3A1L190 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.87■□□□□ 0.93
SYCE3A1L190 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYCE3A1L190 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYCE3A1L190 AC026271.2-201ENST00000428091 497 ntBASIC20.87■□□□□ 0.93
SYCE3A1L190 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SYCE3A1L190 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.87■□□□□ 0.93
SYCE3A1L190 AC083906.2-201ENST00000511578 360 ntBASIC20.87■□□□□ 0.93
SYCE3A1L190 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.87■□□□□ 0.93
SYCE3A1L190 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.87■□□□□ 0.93
SYCE3A1L190 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYCE3A1L190 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.87■□□□□ 0.93
SYCE3A1L190 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.87■□□□□ 0.93
SYCE3A1L190 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYCE3A1L190 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
SYCE3A1L190 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.87■□□□□ 0.93
SYCE3A1L190 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SYCE3A1L190 LINC00602-201ENST00000629776 2065 ntBASIC20.87■□□□□ 0.93
SYCE3A1L190 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.87■□□□□ 0.93
SYCE3A1L190 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
SYCE3A1L190 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYCE3A1L190 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SYCE3A1L190 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYCE3A1L190 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYCE3A1L190 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYCE3A1L190 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYCE3A1L190 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYCE3A1L190 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.86■□□□□ 0.93
SYCE3A1L190 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYCE3A1L190 AC026185.1-201ENST00000445748 174 ntBASIC20.86■□□□□ 0.93
SYCE3A1L190 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.86■□□□□ 0.93
SYCE3A1L190 KRT18P41-201ENST00000518924 1277 ntBASIC20.86■□□□□ 0.93
SYCE3A1L190 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYCE3A1L190 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.86■□□□□ 0.93
SYCE3A1L190 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYCE3A1L190 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SYCE3A1L190 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYCE3A1L190 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SYCE3A1L190 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYCE3A1L190 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.85■□□□□ 0.93
SYCE3A1L190 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYCE3A1L190 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYCE3A1L190 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
SYCE3A1L190 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYCE3A1L190 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SYCE3A1L190 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.85■□□□□ 0.93
SYCE3A1L190 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.85■□□□□ 0.93
SYCE3A1L190 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SYCE3A1L190 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SYCE3A1L190 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYCE3A1L190 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.85■□□□□ 0.93
SYCE3A1L190 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SYCE3A1L190 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SYCE3A1L190 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.85■□□□□ 0.93
SYCE3A1L190 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.85■□□□□ 0.93
SYCE3A1L190 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SYCE3A1L190 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.85■□□□□ 0.93
SYCE3A1L190 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
SYCE3A1L190 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.84■□□□□ 0.93
SYCE3A1L190 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCE3A1L190 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.84■□□□□ 0.93
SYCE3A1L190 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCE3A1L190 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCE3A1L190 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCE3A1L190 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCE3A1L190 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCE3A1L190 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCE3A1L190 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SYCE3A1L190 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCE3A1L190 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCE3A1L190 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SYCE3A1L190 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.84■□□□□ 0.93
SYCE3A1L190 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.84■□□□□ 0.93
SYCE3A1L190 GUSBP6-202ENST00000438529 1198 ntBASIC20.84■□□□□ 0.93
SYCE3A1L190 PRSS44-201ENST00000515154 1146 ntBASIC20.84■□□□□ 0.93
SYCE3A1L190 PRKY-204ENST00000533551 1019 ntBASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms