Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
SHISA3A0PJX4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHISA3A0PJX4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHISA3A0PJX4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SHISA3A0PJX4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHISA3A0PJX4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.99■□□□□ 0.15
SHISA3A0PJX4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SHISA3A0PJX4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.99■□□□□ 0.15
SHISA3A0PJX4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SHISA3A0PJX4 AL109659.2-201ENST00000606809 1674 ntBASIC15.99■□□□□ 0.15
SHISA3A0PJX4 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SHISA3A0PJX4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 CROCCP2-202ENST00000412962 2773 ntBASIC15.97■□□□□ 0.15
SHISA3A0PJX4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 PRKY-204ENST00000533551 1019 ntBASIC15.97■□□□□ 0.15
SHISA3A0PJX4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SHISA3A0PJX4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.96■□□□□ 0.15
SHISA3A0PJX4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHISA3A0PJX4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.96■□□□□ 0.15
SHISA3A0PJX4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SHISA3A0PJX4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.96■□□□□ 0.15
SHISA3A0PJX4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SHISA3A0PJX4 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHISA3A0PJX4 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHISA3A0PJX4 KRT8P50-201ENST00000562022 1438 ntBASIC15.96■□□□□ 0.15
SHISA3A0PJX4 SDHAP2-201ENST00000455183 2001 ntBASIC15.96■□□□□ 0.15
SHISA3A0PJX4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SHISA3A0PJX4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SHISA3A0PJX4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SHISA3A0PJX4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms