Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHAC2Q9Y5I4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 KRT18P58-201ENST00000527480 1120 ntBASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 SART3-203ENST00000546611 1184 ntBASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 AC139887.3-201ENST00000568585 713 ntBASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 ANKRD20A8P-203ENST00000641373 517 ntBASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.74■■□□□ 1.07
PCDHAC2Q9Y5I4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 AC116562.4-201ENST00000641316 2276 ntBASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
PCDHAC2Q9Y5I4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 AC092865.5-201ENST00000545435 363 ntBASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 AC021087.4-201ENST00000563761 564 ntBASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 AC125634.1-201ENST00000438758 1403 ntBASIC21.72■■□□□ 1.07
PCDHAC2Q9Y5I4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 AC012640.2-201ENST00000561606 901 ntBASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 AC117500.6-201ENST00000624871 588 ntBASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PCDHAC2Q9Y5I4 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
PCDHAC2Q9Y5I4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
PCDHAC2Q9Y5I4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.07
PCDHAC2Q9Y5I4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms