Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 AL512353.2-201ENST00000448759 1962 ntBASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 AC007613.1-201ENST00000572811 2597 ntBASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 AC009078.2-202ENST00000463353 338 ntBASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 AP003733.1-201ENST00000491725 852 ntBASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 AC005332.3-201ENST00000589904 676 ntBASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 AL390719.2-201ENST00000606993 987 ntBASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDHGA9Q9Y5G4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 LTB4R2-202ENST00000528054 3092 ntBASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 AL049812.1-201ENST00000432563 2267 ntBASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 AP000347.1-202ENST00000435868 847 ntBASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 AC106795.1-205ENST00000512851 1056 ntBASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PCDHGA9Q9Y5G4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 AC008556.1-201ENST00000610908 2040 ntBASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 MIR564-202ENST00000385049 94 ntBASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 AL662844.1-201ENST00000546340 181 ntBASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 Z69720.1-201ENST00000601483 472 ntBASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PCDHGA9Q9Y5G4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms