Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 AC002347.1-201ENST00000569543 541 ntBASIC17.33■□□□□ 0.36
LHX6Q9UPM6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 MIR5100-201ENST00000579544 119 ntBASIC17.33■□□□□ 0.36
LHX6Q9UPM6 AP005901.3-202ENST00000581653 237 ntBASIC17.33■□□□□ 0.36
LHX6Q9UPM6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 AFG3L1P-217ENST00000557444 2447 ntBASIC17.33■□□□□ 0.36
LHX6Q9UPM6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.33■□□□□ 0.36
LHX6Q9UPM6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 PCDHAC2-203ENST00000615316 3011 ntBASIC17.32■□□□□ 0.36
LHX6Q9UPM6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.32■□□□□ 0.36
LHX6Q9UPM6 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 RNA5SP416-201ENST00000516838 111 ntBASIC17.32■□□□□ 0.36
LHX6Q9UPM6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 AL158211.2-201ENST00000607282 395 ntBASIC17.32■□□□□ 0.36
LHX6Q9UPM6 AC106028.4-201ENST00000614509 607 ntBASIC17.32■□□□□ 0.36
LHX6Q9UPM6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.32■□□□□ 0.36
LHX6Q9UPM6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LHX6Q9UPM6 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.3■□□□□ 0.36
LHX6Q9UPM6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms