Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 SNHG9-202ENST00000564014 471 ntBASIC18.16■□□□□ 0.5
NCDNQ9UBB6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 MTDHP5-201ENST00000598980 586 ntBASIC18.16■□□□□ 0.5
NCDNQ9UBB6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.16■□□□□ 0.5
NCDNQ9UBB6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NCDNQ9UBB6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
NCDNQ9UBB6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NCDNQ9UBB6 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
NCDNQ9UBB6 TP73-AS1-210ENST00000637775 1455 ntBASIC18.14■□□□□ 0.5
NCDNQ9UBB6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
NCDNQ9UBB6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NCDNQ9UBB6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCDNQ9UBB6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NCDNQ9UBB6 AC034236.2-201ENST00000606662 1610 ntBASIC18.14■□□□□ 0.49
NCDNQ9UBB6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCDNQ9UBB6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCDNQ9UBB6 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.14■□□□□ 0.49
NCDNQ9UBB6 AC007967.2-201ENST00000432613 625 ntBASIC18.14■□□□□ 0.49
NCDNQ9UBB6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NCDNQ9UBB6 AP006288.1-201ENST00000446065 395 ntBASIC18.14■□□□□ 0.49
NCDNQ9UBB6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.14■□□□□ 0.49
NCDNQ9UBB6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.14■□□□□ 0.49
NCDNQ9UBB6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCDNQ9UBB6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NCDNQ9UBB6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NCDNQ9UBB6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NCDNQ9UBB6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
NCDNQ9UBB6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NCDNQ9UBB6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 AL691432.2-201ENST00000607222 2038 ntBASIC18.13■□□□□ 0.49
NCDNQ9UBB6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 AC023274.1-201ENST00000418278 595 ntBASIC18.13■□□□□ 0.49
NCDNQ9UBB6 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
NCDNQ9UBB6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 263 ms