Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NCKIPSDQ9NZQ3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 AC018470.1-201ENST00000624790 3129 ntBASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 FAM86EP-206ENST00000510506 987 ntBASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 AL441883.1-201ENST00000566170 1045 ntBASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 KRT8P45-201ENST00000414328 1447 ntBASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
NCKIPSDQ9NZQ3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 AC073592.3-201ENST00000625118 1834 ntBASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 AL359075.1-203ENST00000462729 1002 ntBASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
NCKIPSDQ9NZQ3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
NCKIPSDQ9NZQ3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NCKIPSDQ9NZQ3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms