Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TRMT13Q9NUP7 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRMT13Q9NUP7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRMT13Q9NUP7 SCARNA2-201ENST00000458748 420 ntBASIC20.09■□□□□ 0.81
TRMT13Q9NUP7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
TRMT13Q9NUP7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.09■□□□□ 0.81
TRMT13Q9NUP7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.09■□□□□ 0.81
TRMT13Q9NUP7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRMT13Q9NUP7 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRMT13Q9NUP7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRMT13Q9NUP7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
TRMT13Q9NUP7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TRMT13Q9NUP7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.09■□□□□ 0.81
TRMT13Q9NUP7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRMT13Q9NUP7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRMT13Q9NUP7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRMT13Q9NUP7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRMT13Q9NUP7 AL049812.1-201ENST00000432563 2267 ntBASIC20.09■□□□□ 0.81
TRMT13Q9NUP7 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.08■□□□□ 0.81
TRMT13Q9NUP7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRMT13Q9NUP7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.08■□□□□ 0.81
TRMT13Q9NUP7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.08■□□□□ 0.81
TRMT13Q9NUP7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.08■□□□□ 0.81
TRMT13Q9NUP7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRMT13Q9NUP7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRMT13Q9NUP7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.08■□□□□ 0.81
TRMT13Q9NUP7 AL024508.2-201ENST00000607749 1894 ntBASIC20.08■□□□□ 0.81
TRMT13Q9NUP7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRMT13Q9NUP7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.08■□□□□ 0.81
TRMT13Q9NUP7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.08■□□□□ 0.81
TRMT13Q9NUP7 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TRMT13Q9NUP7 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.08■□□□□ 0.81
TRMT13Q9NUP7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TRMT13Q9NUP7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.08■□□□□ 0.81
TRMT13Q9NUP7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.08■□□□□ 0.81
TRMT13Q9NUP7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TRMT13Q9NUP7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRMT13Q9NUP7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRMT13Q9NUP7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRMT13Q9NUP7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
TRMT13Q9NUP7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRMT13Q9NUP7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 AL161938.1-201ENST00000569833 2180 ntBASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 AC008687.5-201ENST00000593746 558 ntBASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 INTS4P1-201ENST00000438455 1935 ntBASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 ZNF259P1-201ENST00000407656 1365 ntBASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRMT13Q9NUP7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 BX842568.4-201ENST00000421222 227 ntBASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 AL138831.2-201ENST00000606564 490 ntBASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRMT13Q9NUP7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRMT13Q9NUP7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.05■□□□□ 0.8
TRMT13Q9NUP7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRMT13Q9NUP7 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRMT13Q9NUP7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms