Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 LINC01126-201ENST00000623515 1646 ntBASIC18.68■□□□□ 0.58
SPHK2Q9NRA0 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHK2Q9NRA0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHK2Q9NRA0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHK2Q9NRA0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.68■□□□□ 0.58
SPHK2Q9NRA0 FDX1P1-201ENST00000449115 551 ntBASIC18.68■□□□□ 0.58
SPHK2Q9NRA0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPHK2Q9NRA0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPHK2Q9NRA0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.68■□□□□ 0.58
SPHK2Q9NRA0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPHK2Q9NRA0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPHK2Q9NRA0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
SPHK2Q9NRA0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SPHK2Q9NRA0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.68■□□□□ 0.58
SPHK2Q9NRA0 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SPHK2Q9NRA0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 NUS1P2-201ENST00000417358 873 ntBASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 AC068472.1-201ENST00000474589 881 ntBASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 AL031008.1-201ENST00000619963 541 ntBASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SPHK2Q9NRA0 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 KRT8P10-201ENST00000450021 1447 ntBASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 POM121L3P-201ENST00000419331 1163 ntBASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 AC005082.1-201ENST00000413042 2259 ntBASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SPHK2Q9NRA0 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 AC079781.3-201ENST00000449110 356 ntBASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 AC104692.2-201ENST00000603054 253 ntBASIC18.65■□□□□ 0.58
SPHK2Q9NRA0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms