Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.49■□□□□ 0.23
SPENQ96T58 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.49■□□□□ 0.23
SPENQ96T58 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.49■□□□□ 0.23
SPENQ96T58 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPENQ96T58 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPENQ96T58 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPENQ96T58 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.49■□□□□ 0.23
SPENQ96T58 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SPENQ96T58 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPENQ96T58 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.49■□□□□ 0.23
SPENQ96T58 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPENQ96T58 YBX2P1-201ENST00000394192 760 ntBASIC16.49■□□□□ 0.23
SPENQ96T58 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.49■□□□□ 0.23
SPENQ96T58 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
SPENQ96T58 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.49■□□□□ 0.23
SPENQ96T58 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPENQ96T58 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.49■□□□□ 0.23
SPENQ96T58 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPENQ96T58 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SPENQ96T58 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SPENQ96T58 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.49■□□□□ 0.23
SPENQ96T58 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPENQ96T58 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPENQ96T58 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.49■□□□□ 0.23
SPENQ96T58 AC211486.1-202ENST00000416371 468 ntBASIC16.49■□□□□ 0.23
SPENQ96T58 AC211476.1-201ENST00000503899 468 ntBASIC16.49■□□□□ 0.23
SPENQ96T58 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SPENQ96T58 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SPENQ96T58 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.49■□□□□ 0.23
SPENQ96T58 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPENQ96T58 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SPENQ96T58 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
SPENQ96T58 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
SPENQ96T58 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.48■□□□□ 0.23
SPENQ96T58 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.48■□□□□ 0.23
SPENQ96T58 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC16.48■□□□□ 0.23
SPENQ96T58 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPENQ96T58 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPENQ96T58 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SPENQ96T58 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPENQ96T58 KRT18P41-201ENST00000518924 1277 ntBASIC16.48■□□□□ 0.23
SPENQ96T58 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.48■□□□□ 0.23
SPENQ96T58 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SPENQ96T58 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.48■□□□□ 0.23
SPENQ96T58 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPENQ96T58 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SPENQ96T58 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SPENQ96T58 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPENQ96T58 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SPENQ96T58 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SPENQ96T58 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
SPENQ96T58 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SPENQ96T58 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.48■□□□□ 0.23
SPENQ96T58 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SPENQ96T58 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPENQ96T58 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.47■□□□□ 0.23
SPENQ96T58 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPENQ96T58 AL163051.1-201ENST00000569214 1512 ntBASIC16.47■□□□□ 0.23
SPENQ96T58 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SPENQ96T58 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SPENQ96T58 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SPENQ96T58 AC004967.1-201ENST00000453589 447 ntBASIC16.47■□□□□ 0.23
SPENQ96T58 YBX1P5-201ENST00000509441 847 ntBASIC16.47■□□□□ 0.23
SPENQ96T58 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.47■□□□□ 0.23
SPENQ96T58 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.47■□□□□ 0.23
SPENQ96T58 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SPENQ96T58 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.47■□□□□ 0.23
SPENQ96T58 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPENQ96T58 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPENQ96T58 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPENQ96T58 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPENQ96T58 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.47■□□□□ 0.23
SPENQ96T58 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
SPENQ96T58 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SPENQ96T58 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SPENQ96T58 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.47■□□□□ 0.23
SPENQ96T58 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPENQ96T58 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.47■□□□□ 0.23
SPENQ96T58 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPENQ96T58 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPENQ96T58 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.47■□□□□ 0.23
SPENQ96T58 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPENQ96T58 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.47■□□□□ 0.23
SPENQ96T58 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SPENQ96T58 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SPENQ96T58 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.47■□□□□ 0.23
SPENQ96T58 AL591424.1-201ENST00000442569 1213 ntBASIC16.47■□□□□ 0.23
SPENQ96T58 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.47■□□□□ 0.23
SPENQ96T58 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPENQ96T58 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPENQ96T58 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.46■□□□□ 0.23
SPENQ96T58 AC011840.4-201ENST00000578471 627 ntBASIC16.46■□□□□ 0.23
SPENQ96T58 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.46■□□□□ 0.23
SPENQ96T58 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.46■□□□□ 0.23
SPENQ96T58 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
SPENQ96T58 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.46■□□□□ 0.23
SPENQ96T58 AC125634.1-201ENST00000438758 1403 ntBASIC16.46■□□□□ 0.23
SPENQ96T58 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SPENQ96T58 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SPENQ96T58 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms