Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40CQ96S21 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB40CQ96S21 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40CQ96S21 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40CQ96S21 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40CQ96S21 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAB40CQ96S21 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40CQ96S21 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40CQ96S21 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40CQ96S21 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40CQ96S21 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40CQ96S21 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40CQ96S21 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40CQ96S21 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB40CQ96S21 ID1-201ENST00000376105 1233 ntBASIC14.89□□□□□ -0.03
RAB40CQ96S21 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40CQ96S21 HLA-L-209ENST00000420110 1011 ntBASIC14.89□□□□□ -0.03
RAB40CQ96S21 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB40CQ96S21 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.89□□□□□ -0.03
RAB40CQ96S21 PRKY-204ENST00000533551 1019 ntBASIC14.89□□□□□ -0.03
RAB40CQ96S21 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RAB40CQ96S21 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RAB40CQ96S21 AC004264.1-201ENST00000608354 794 ntBASIC14.89□□□□□ -0.03
RAB40CQ96S21 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40CQ96S21 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.89□□□□□ -0.03
RAB40CQ96S21 AC133041.1-202ENST00000642053 222 ntBASIC14.89□□□□□ -0.03
RAB40CQ96S21 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAB40CQ96S21 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40CQ96S21 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAB40CQ96S21 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RAB40CQ96S21 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40CQ96S21 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB40CQ96S21 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB40CQ96S21 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40CQ96S21 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40CQ96S21 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40CQ96S21 AL096828.2-201ENST00000567259 1965 ntBASIC14.89□□□□□ -0.03
RAB40CQ96S21 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40CQ96S21 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40CQ96S21 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB40CQ96S21 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.89□□□□□ -0.03
RAB40CQ96S21 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40CQ96S21 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40CQ96S21 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40CQ96S21 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40CQ96S21 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40CQ96S21 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40CQ96S21 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 AC008687.6-201ENST00000596318 630 ntBASIC14.88□□□□□ -0.03
RAB40CQ96S21 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40CQ96S21 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 GMCL1P1-201ENST00000463439 1581 ntBASIC14.88□□□□□ -0.03
RAB40CQ96S21 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40CQ96S21 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40CQ96S21 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40CQ96S21 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40CQ96S21 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40CQ96S21 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40CQ96S21 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB40CQ96S21 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RAB40CQ96S21 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 AC108860.2-201ENST00000562760 2183 ntBASIC14.87□□□□□ -0.03
RAB40CQ96S21 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 KRT8P11-201ENST00000409686 1436 ntBASIC14.87□□□□□ -0.03
RAB40CQ96S21 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB40CQ96S21 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB40CQ96S21 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms