Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 AC008556.1-201ENST00000610908 2040 ntBASIC5.55□□□□□ -1.52
HMCN1Q96RW7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 LDHBP1-201ENST00000455730 1119 ntBASIC5.55□□□□□ -1.52
HMCN1Q96RW7 GIMAP3P-201ENST00000495150 836 ntBASIC5.55□□□□□ -1.52
HMCN1Q96RW7 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 AC074386.1-202ENST00000463561 864 ntBASIC5.55□□□□□ -1.52
HMCN1Q96RW7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 AL109659.2-201ENST00000606809 1674 ntBASIC5.55□□□□□ -1.52
HMCN1Q96RW7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 AL353135.1-201ENST00000606729 504 ntBASIC5.55□□□□□ -1.52
HMCN1Q96RW7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 SMG8-203ENST00000578922 2178 ntBASIC5.55□□□□□ -1.52
HMCN1Q96RW7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC5.55□□□□□ -1.52
HMCN1Q96RW7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 PPP6R2P1-201ENST00000450880 1275 ntBASIC5.54□□□□□ -1.52
HMCN1Q96RW7 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 BAD-207ENST00000544785 525 ntTSL 3 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 AC020907.1-201ENST00000616460 1350 ntBASIC5.54□□□□□ -1.52
HMCN1Q96RW7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC5.54□□□□□ -1.52
HMCN1Q96RW7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms