Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB3IPQ96QF0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 RCC2P6-201ENST00000526625 1557 ntBASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 LINC02228-203ENST00000641970 1355 ntBASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB3IPQ96QF0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RAB3IPQ96QF0 UBALD1-205ENST00000590891 2641 ntBASIC17.89■□□□□ 0.46
RAB3IPQ96QF0 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 PCDHB19P-201ENST00000570871 2371 ntBASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 UBE2DNL-204ENST00000602536 740 ntBASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 MYCNOS-205ENST00000641950 531 ntBASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB3IPQ96QF0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 AC123595.1-201ENST00000440769 1046 ntBASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 RARRES2P4-201ENST00000514074 484 ntBASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.88■□□□□ 0.45
RAB3IPQ96QF0 AC068587.9-201ENST00000641814 219 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms