Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.52■□□□□ 0.07
SPG11Q96JI7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SPG11Q96JI7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SPG11Q96JI7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SPG11Q96JI7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SPG11Q96JI7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SPG11Q96JI7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.52■□□□□ 0.07
SPG11Q96JI7 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.52■□□□□ 0.07
SPG11Q96JI7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
SPG11Q96JI7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SPG11Q96JI7 AC007952.6-201ENST00000573168 2673 ntBASIC15.51■□□□□ 0.07
SPG11Q96JI7 AC003957.1-201ENST00000625108 2673 ntBASIC15.51■□□□□ 0.07
SPG11Q96JI7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPG11Q96JI7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SPG11Q96JI7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPG11Q96JI7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SPG11Q96JI7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPG11Q96JI7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPG11Q96JI7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPG11Q96JI7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPG11Q96JI7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SPG11Q96JI7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPG11Q96JI7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SPG11Q96JI7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPG11Q96JI7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPG11Q96JI7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPG11Q96JI7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPG11Q96JI7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPG11Q96JI7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SPG11Q96JI7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.51■□□□□ 0.07
SPG11Q96JI7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPG11Q96JI7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPG11Q96JI7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPG11Q96JI7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPG11Q96JI7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.5■□□□□ 0.07
SPG11Q96JI7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPG11Q96JI7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPG11Q96JI7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.5■□□□□ 0.07
SPG11Q96JI7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SPG11Q96JI7 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.5■□□□□ 0.07
SPG11Q96JI7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPG11Q96JI7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.5■□□□□ 0.07
SPG11Q96JI7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.5■□□□□ 0.07
SPG11Q96JI7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPG11Q96JI7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPG11Q96JI7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.5■□□□□ 0.07
SPG11Q96JI7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.5■□□□□ 0.07
SPG11Q96JI7 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SPG11Q96JI7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPG11Q96JI7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
SPG11Q96JI7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPG11Q96JI7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.5■□□□□ 0.07
SPG11Q96JI7 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPG11Q96JI7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SPG11Q96JI7 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SPG11Q96JI7 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPG11Q96JI7 RCN1P2-201ENST00000398357 915 ntBASIC15.49■□□□□ 0.07
SPG11Q96JI7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SPG11Q96JI7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.49■□□□□ 0.07
SPG11Q96JI7 CNN2P11-201ENST00000429351 262 ntBASIC15.49■□□□□ 0.07
SPG11Q96JI7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.49■□□□□ 0.07
SPG11Q96JI7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.49■□□□□ 0.07
SPG11Q96JI7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SPG11Q96JI7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.49■□□□□ 0.07
SPG11Q96JI7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SPG11Q96JI7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPG11Q96JI7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPG11Q96JI7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.49■□□□□ 0.07
SPG11Q96JI7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
SPG11Q96JI7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SPG11Q96JI7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPG11Q96JI7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.49■□□□□ 0.07
SPG11Q96JI7 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPG11Q96JI7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SPG11Q96JI7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms