Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 AL121912.1-201ENST00000603683 238 ntBASIC18.37■□□□□ 0.53
SIPA1Q96FS4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.37■□□□□ 0.53
SIPA1Q96FS4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.36■□□□□ 0.53
SIPA1Q96FS4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SIPA1Q96FS4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 POM121L3P-201ENST00000419331 1163 ntBASIC18.35■□□□□ 0.53
SIPA1Q96FS4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 AC113404.2-201ENST00000507884 177 ntBASIC18.35■□□□□ 0.53
SIPA1Q96FS4 AP002469.2-201ENST00000531724 424 ntBASIC18.35■□□□□ 0.53
SIPA1Q96FS4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.35■□□□□ 0.53
SIPA1Q96FS4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 AC099343.3-201ENST00000605834 2503 ntBASIC18.35■□□□□ 0.53
SIPA1Q96FS4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 AC005332.7-201ENST00000614046 2005 ntBASIC18.35■□□□□ 0.53
SIPA1Q96FS4 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SIPA1Q96FS4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 AC112777.1-201ENST00000540175 1423 ntBASIC18.34■□□□□ 0.53
SIPA1Q96FS4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.34■□□□□ 0.53
SIPA1Q96FS4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.34■□□□□ 0.53
SIPA1Q96FS4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms