Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A3Q93084 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A3Q93084 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A3Q93084 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A3Q93084 AL450487.1-201ENST00000426799 995 ntBASIC19.32■□□□□ 0.68
ATP2A3Q93084 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A3Q93084 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.32■□□□□ 0.68
ATP2A3Q93084 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A3Q93084 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A3Q93084 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A3Q93084 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ATP2A3Q93084 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A3Q93084 FP475955.4-201ENST00000623131 1990 ntBASIC19.32■□□□□ 0.68
ATP2A3Q93084 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
ATP2A3Q93084 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A3Q93084 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A3Q93084 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A3Q93084 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A3Q93084 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A3Q93084 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A3Q93084 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
ATP2A3Q93084 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A3Q93084 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ATP2A3Q93084 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A3Q93084 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A3Q93084 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A3Q93084 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A3Q93084 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A3Q93084 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ATP2A3Q93084 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ATP2A3Q93084 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.31■□□□□ 0.68
ATP2A3Q93084 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A3Q93084 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.31■□□□□ 0.68
ATP2A3Q93084 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.31■□□□□ 0.68
ATP2A3Q93084 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ATP2A3Q93084 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.31■□□□□ 0.68
ATP2A3Q93084 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A3Q93084 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A3Q93084 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ATP2A3Q93084 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A3Q93084 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A3Q93084 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.31■□□□□ 0.68
ATP2A3Q93084 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A3Q93084 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A3Q93084 NEFHP1-201ENST00000412845 2629 ntBASIC19.31■□□□□ 0.68
ATP2A3Q93084 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.31■□□□□ 0.68
ATP2A3Q93084 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ATP2A3Q93084 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A3Q93084 AL109659.2-201ENST00000606809 1674 ntBASIC19.3■□□□□ 0.68
ATP2A3Q93084 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ATP2A3Q93084 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A3Q93084 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A3Q93084 AC006333.2-201ENST00000607957 2099 ntBASIC19.3■□□□□ 0.68
ATP2A3Q93084 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A3Q93084 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.3■□□□□ 0.68
ATP2A3Q93084 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A3Q93084 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.3■□□□□ 0.68
ATP2A3Q93084 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A3Q93084 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A3Q93084 OR6D1P-202ENST00000641007 5290 ntBASIC19.3■□□□□ 0.68
ATP2A3Q93084 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
ATP2A3Q93084 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ATP2A3Q93084 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.3■□□□□ 0.68
ATP2A3Q93084 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.3■□□□□ 0.68
ATP2A3Q93084 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A3Q93084 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ATP2A3Q93084 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A3Q93084 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ATP2A3Q93084 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A3Q93084 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A3Q93084 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A3Q93084 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A3Q93084 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A3Q93084 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ATP2A3Q93084 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A3Q93084 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A3Q93084 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A3Q93084 AC011498.5-201ENST00000592027 486 ntBASIC19.29■□□□□ 0.68
ATP2A3Q93084 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ATP2A3Q93084 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms