Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.57■□□□□ 0.72
SHC3Q92529 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SHC3Q92529 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC3Q92529 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC3Q92529 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SHC3Q92529 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC3Q92529 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SHC3Q92529 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC3Q92529 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC3Q92529 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC3Q92529 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SHC3Q92529 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SHC3Q92529 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SHC3Q92529 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC3Q92529 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHC3Q92529 FLJ13224-201ENST00000313737 1514 ntBASIC19.56■□□□□ 0.72
SHC3Q92529 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SHC3Q92529 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC3Q92529 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.56■□□□□ 0.72
SHC3Q92529 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC3Q92529 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC3Q92529 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC3Q92529 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC3Q92529 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SHC3Q92529 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC3Q92529 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SHC3Q92529 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHC3Q92529 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.56■□□□□ 0.72
SHC3Q92529 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.56■□□□□ 0.72
SHC3Q92529 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.56■□□□□ 0.72
SHC3Q92529 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.56■□□□□ 0.72
SHC3Q92529 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.56■□□□□ 0.72
SHC3Q92529 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.56■□□□□ 0.72
SHC3Q92529 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.56■□□□□ 0.72
SHC3Q92529 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC3Q92529 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.56■□□□□ 0.72
SHC3Q92529 AC073508.3-201ENST00000619697 1419 ntBASIC19.56■□□□□ 0.72
SHC3Q92529 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC3Q92529 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC3Q92529 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SHC3Q92529 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SHC3Q92529 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SHC3Q92529 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.56■□□□□ 0.72
SHC3Q92529 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
SHC3Q92529 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SHC3Q92529 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
SHC3Q92529 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC3Q92529 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.55■□□□□ 0.72
SHC3Q92529 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHC3Q92529 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC3Q92529 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.55■□□□□ 0.72
SHC3Q92529 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHC3Q92529 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHC3Q92529 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SHC3Q92529 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC3Q92529 TERF1P1-201ENST00000311003 1181 ntBASIC19.55■□□□□ 0.72
SHC3Q92529 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC3Q92529 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SHC3Q92529 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.55■□□□□ 0.72
SHC3Q92529 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC3Q92529 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.55■□□□□ 0.72
SHC3Q92529 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC3Q92529 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.55■□□□□ 0.72
SHC3Q92529 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.55■□□□□ 0.72
SHC3Q92529 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
SHC3Q92529 AC005363.2-201ENST00000618631 242 ntBASIC19.55■□□□□ 0.72
SHC3Q92529 AL023973.1-201ENST00000624619 620 ntBASIC19.55■□□□□ 0.72
SHC3Q92529 AC068880.1-201ENST00000507289 2297 ntBASIC19.55■□□□□ 0.72
SHC3Q92529 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SHC3Q92529 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC3Q92529 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC3Q92529 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC3Q92529 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.55■□□□□ 0.72
SHC3Q92529 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
SHC3Q92529 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SHC3Q92529 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SHC3Q92529 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC3Q92529 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHC3Q92529 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC3Q92529 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC3Q92529 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.54■□□□□ 0.72
SHC3Q92529 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC3Q92529 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC3Q92529 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC3Q92529 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.54■□□□□ 0.72
SHC3Q92529 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC3Q92529 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SHC3Q92529 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC3Q92529 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.54■□□□□ 0.72
SHC3Q92529 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC3Q92529 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SHC3Q92529 PVRIG2P-201ENST00000435460 978 ntBASIC19.54■□□□□ 0.72
SHC3Q92529 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC3Q92529 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.54■□□□□ 0.72
SHC3Q92529 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
SHC3Q92529 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
SHC3Q92529 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC3Q92529 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC3Q92529 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SHC3Q92529 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms