Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 AC092368.3-202ENST00000574180 1591 ntBASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CNIH3Q8TBE1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 AC004911.1-201ENST00000416316 871 ntBASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 AF201337.1-201ENST00000520239 748 ntBASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 AC120498.8-201ENST00000614275 531 ntBASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CNIH3Q8TBE1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CNIH3Q8TBE1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.77■□□□□ 0.27
CNIH3Q8TBE1 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CNIH3Q8TBE1 PHGDH-209ENST00000641074 1780 ntBASIC16.77■□□□□ 0.27
CNIH3Q8TBE1 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 LINC00602-201ENST00000629776 2065 ntBASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 AC008894.3-201ENST00000624324 3103 ntBASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 POU5F1P3-201ENST00000428824 1078 ntBASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 KRT8P3-201ENST00000519669 1449 ntBASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CNIH3Q8TBE1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CNIH3Q8TBE1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNIH3Q8TBE1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CNIH3Q8TBE1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CNIH3Q8TBE1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.75■□□□□ 0.27
CNIH3Q8TBE1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms