Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SNIP1Q8TAD8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.27■□□□□ 0.35
SNIP1Q8TAD8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.27■□□□□ 0.35
SNIP1Q8TAD8 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNIP1Q8TAD8 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SNIP1Q8TAD8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SNIP1Q8TAD8 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SNIP1Q8TAD8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SNIP1Q8TAD8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 AC004967.1-201ENST00000453589 447 ntBASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 MIR3687-2-201ENST00000577708 61 ntBASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 MIR3687-1-201ENST00000614492 61 ntBASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SNIP1Q8TAD8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 KRT8P32-201ENST00000512863 1461 ntBASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 RCN1P2-201ENST00000398357 915 ntBASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 AC034105.1-201ENST00000563488 319 ntBASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SNIP1Q8TAD8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 YBX2P1-201ENST00000394192 760 ntBASIC17.24■□□□□ 0.35
SNIP1Q8TAD8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms