Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 RPS2P52-201ENST00000469610 820 ntBASIC13.73□□□□□ -0.21
NUP35Q8NFH5 AC005181.1-201ENST00000604782 1256 ntBASIC13.73□□□□□ -0.21
NUP35Q8NFH5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
NUP35Q8NFH5 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 MYLKP1-201ENST00000509077 1580 ntBASIC13.72□□□□□ -0.21
NUP35Q8NFH5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 MAX-217ENST00000557277 728 ntTSL 3 BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 AL121906.2-201ENST00000621597 723 ntBASIC13.72□□□□□ -0.21
NUP35Q8NFH5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 AC011270.2-201ENST00000624293 2550 ntBASIC13.72□□□□□ -0.21
NUP35Q8NFH5 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP35Q8NFH5 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 FER1L4-210ENST00000615531 5998 ntBASIC13.71□□□□□ -0.21
NUP35Q8NFH5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NUP35Q8NFH5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NUP35Q8NFH5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.71□□□□□ -0.22
NUP35Q8NFH5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms