Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
VPS8Q8N3P4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC28.56■■■□□ 2.16
VPS8Q8N3P4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
VPS8Q8N3P4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC28.55■■■□□ 2.16
VPS8Q8N3P4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
VPS8Q8N3P4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
VPS8Q8N3P4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
VPS8Q8N3P4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC28.55■■■□□ 2.16
VPS8Q8N3P4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
VPS8Q8N3P4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC28.55■■■□□ 2.16
VPS8Q8N3P4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
VPS8Q8N3P4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
VPS8Q8N3P4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
VPS8Q8N3P4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC28.55■■■□□ 2.16
VPS8Q8N3P4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
VPS8Q8N3P4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
VPS8Q8N3P4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
VPS8Q8N3P4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC28.54■■■□□ 2.16
VPS8Q8N3P4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
VPS8Q8N3P4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
VPS8Q8N3P4 IGHV3-41-201ENST00000613121 348 ntBASIC28.54■■■□□ 2.16
VPS8Q8N3P4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
VPS8Q8N3P4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC28.54■■■□□ 2.16
VPS8Q8N3P4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC28.54■■■□□ 2.16
VPS8Q8N3P4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC28.54■■■□□ 2.16
VPS8Q8N3P4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC28.54■■■□□ 2.16
VPS8Q8N3P4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
VPS8Q8N3P4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
VPS8Q8N3P4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
VPS8Q8N3P4 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
VPS8Q8N3P4 POR-209ENST00000439269 1858 ntTSL 2 BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 KRT17P6-201ENST00000453795 1220 ntBASIC28.53■■■□□ 2.16
VPS8Q8N3P4 AP000867.3-201ENST00000524675 377 ntBASIC28.53■■■□□ 2.16
VPS8Q8N3P4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 AC074051.2-201ENST00000565115 352 ntBASIC28.53■■■□□ 2.16
VPS8Q8N3P4 MIR3652-201ENST00000579335 131 ntBASIC28.53■■■□□ 2.16
VPS8Q8N3P4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 SP100-208ENST00000427101 1922 ntTSL 2 BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC28.53■■■□□ 2.16
VPS8Q8N3P4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 AC068472.1-201ENST00000474589 881 ntBASIC28.52■■■□□ 2.16
VPS8Q8N3P4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 BNIP3P18-201ENST00000593976 575 ntBASIC28.52■■■□□ 2.16
VPS8Q8N3P4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 NSUN5P1-202ENST00000421140 1535 ntBASIC28.52■■■□□ 2.16
VPS8Q8N3P4 NSUN5P2-203ENST00000457352 1529 ntBASIC28.52■■■□□ 2.16
VPS8Q8N3P4 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 AC009113.1-201ENST00000570267 2443 ntBASIC28.52■■■□□ 2.16
VPS8Q8N3P4 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 AC090164.3-201ENST00000610780 2143 ntBASIC28.52■■■□□ 2.16
VPS8Q8N3P4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 EFTUD1P1-204ENST00000560401 1798 ntBASIC28.52■■■□□ 2.16
VPS8Q8N3P4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 Z69720.1-201ENST00000601483 472 ntBASIC28.52■■■□□ 2.16
VPS8Q8N3P4 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC28.52■■■□□ 2.16
VPS8Q8N3P4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
VPS8Q8N3P4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
VPS8Q8N3P4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
VPS8Q8N3P4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC28.51■■■□□ 2.15
VPS8Q8N3P4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
VPS8Q8N3P4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC28.51■■■□□ 2.15
VPS8Q8N3P4 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
VPS8Q8N3P4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC28.51■■■□□ 2.15
VPS8Q8N3P4 KRT8P47-201ENST00000604727 1398 ntBASIC28.51■■■□□ 2.15
VPS8Q8N3P4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
VPS8Q8N3P4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
VPS8Q8N3P4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC28.51■■■□□ 2.15
VPS8Q8N3P4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
VPS8Q8N3P4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC28.51■■■□□ 2.15
VPS8Q8N3P4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC28.51■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms