Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
LINC00346Q8IVM7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
LINC00346Q8IVM7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
LINC00346Q8IVM7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00346Q8IVM7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.19
LINC00346Q8IVM7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00346Q8IVM7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
LINC00346Q8IVM7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 NOC2LP2-201ENST00000407594 1944 ntBASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 REXO1L9P-201ENST00000604264 2108 ntBASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 AL023803.3-201ENST00000615559 522 ntBASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 OR6D1P-202ENST00000641007 5290 ntBASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC00346Q8IVM7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 SLC25A1P2-201ENST00000430693 912 ntBASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 FITM1-202ENST00000559294 800 ntBASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 AL353719.1-201ENST00000566847 864 ntBASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 FZD10-202ENST00000539839 3282 ntBASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 PKD1P1-201ENST00000458669 6805 ntBASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LINC00346Q8IVM7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 TSPY17P-201ENST00000450329 467 ntBASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 CR769767.2-201ENST00000622735 460 ntBASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 AC067852.2-201ENST00000590513 2313 ntBASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.24■□□□□ 0.19
LINC00346Q8IVM7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms