Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.85■□□□□ 0.13
LRRK2Q5S007 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRK2Q5S007 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRK2Q5S007 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRK2Q5S007 SIGLEC16-201ENST00000599858 1437 ntBASIC15.84■□□□□ 0.13
LRRK2Q5S007 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRK2Q5S007 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRK2Q5S007 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRK2Q5S007 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRK2Q5S007 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 MRPL20P1-201ENST00000400819 433 ntBASIC15.84■□□□□ 0.13
LRRK2Q5S007 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 AC108073.2-201ENST00000464002 357 ntBASIC15.84■□□□□ 0.13
LRRK2Q5S007 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRK2Q5S007 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRK2Q5S007 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRK2Q5S007 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 AC055876.3-201ENST00000431496 288 ntBASIC15.84■□□□□ 0.13
LRRK2Q5S007 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 KRT18P41-201ENST00000518924 1277 ntBASIC15.84■□□□□ 0.13
LRRK2Q5S007 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRRK2Q5S007 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.84■□□□□ 0.13
LRRK2Q5S007 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRRK2Q5S007 AC138649.4-201ENST00000612222 287 ntBASIC15.84■□□□□ 0.13
LRRK2Q5S007 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
LRRK2Q5S007 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.83■□□□□ 0.13
LRRK2Q5S007 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
LRRK2Q5S007 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
LRRK2Q5S007 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRK2Q5S007 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRK2Q5S007 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRK2Q5S007 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRK2Q5S007 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRK2Q5S007 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRK2Q5S007 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.83■□□□□ 0.12
LRRK2Q5S007 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRK2Q5S007 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRK2Q5S007 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRK2Q5S007 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.83■□□□□ 0.12
LRRK2Q5S007 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRK2Q5S007 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRK2Q5S007 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRK2Q5S007 AC025678.2-201ENST00000562061 970 ntBASIC15.83■□□□□ 0.12
LRRK2Q5S007 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.12
LRRK2Q5S007 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRK2Q5S007 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRK2Q5S007 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRK2Q5S007 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRK2Q5S007 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRK2Q5S007 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
LRRK2Q5S007 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRK2Q5S007 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRK2Q5S007 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRK2Q5S007 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.83■□□□□ 0.12
LRRK2Q5S007 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
LRRK2Q5S007 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.83■□□□□ 0.12
LRRK2Q5S007 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRK2Q5S007 AC009154.2-201ENST00000621177 724 ntBASIC15.83■□□□□ 0.12
LRRK2Q5S007 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.83■□□□□ 0.12
LRRK2Q5S007 AC092902.6-201ENST00000641783 218 ntBASIC15.83■□□□□ 0.12
LRRK2Q5S007 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRK2Q5S007 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRK2Q5S007 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
LRRK2Q5S007 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRK2Q5S007 KRT8P32-201ENST00000512863 1461 ntBASIC15.82■□□□□ 0.12
LRRK2Q5S007 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRK2Q5S007 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
LRRK2Q5S007 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRK2Q5S007 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRK2Q5S007 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRK2Q5S007 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.82■□□□□ 0.12
LRRK2Q5S007 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LRRK2Q5S007 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRK2Q5S007 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRK2Q5S007 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
LRRK2Q5S007 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRK2Q5S007 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LRRK2Q5S007 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.82■□□□□ 0.12
LRRK2Q5S007 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRK2Q5S007 AC069262.1-201ENST00000539058 672 ntBASIC15.82■□□□□ 0.12
LRRK2Q5S007 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.82■□□□□ 0.12
LRRK2Q5S007 AC015911.4-201ENST00000588022 1070 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms