Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD47Q08722 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD47Q08722 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD47Q08722 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.06■□□□□ 0.32
CD47Q08722 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
CD47Q08722 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.06■□□□□ 0.32
CD47Q08722 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CD47Q08722 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD47Q08722 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD47Q08722 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.06■□□□□ 0.32
CD47Q08722 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD47Q08722 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD47Q08722 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD47Q08722 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD47Q08722 TSPY23P-201ENST00000440136 739 ntBASIC17.06■□□□□ 0.32
CD47Q08722 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.06■□□□□ 0.32
CD47Q08722 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.06■□□□□ 0.32
CD47Q08722 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.06■□□□□ 0.32
CD47Q08722 C1QBPP2-201ENST00000528754 825 ntBASIC17.06■□□□□ 0.32
CD47Q08722 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.06■□□□□ 0.32
CD47Q08722 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD47Q08722 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD47Q08722 PP12613-201ENST00000424958 2230 ntBASIC17.06■□□□□ 0.32
CD47Q08722 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
CD47Q08722 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CD47Q08722 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
CD47Q08722 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD47Q08722 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CD47Q08722 AC141586.5-201ENST00000624546 2050 ntBASIC17.06■□□□□ 0.32
CD47Q08722 RCC2P6-201ENST00000526625 1557 ntBASIC17.06■□□□□ 0.32
CD47Q08722 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD47Q08722 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD47Q08722 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD47Q08722 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD47Q08722 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD47Q08722 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD47Q08722 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CD47Q08722 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CD47Q08722 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CD47Q08722 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.05■□□□□ 0.32
CD47Q08722 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD47Q08722 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD47Q08722 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CD47Q08722 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CD47Q08722 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CD47Q08722 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CD47Q08722 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.05■□□□□ 0.32
CD47Q08722 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD47Q08722 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CD47Q08722 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.05■□□□□ 0.32
CD47Q08722 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.05■□□□□ 0.32
CD47Q08722 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
CD47Q08722 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.05■□□□□ 0.32
CD47Q08722 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD47Q08722 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD47Q08722 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD47Q08722 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD47Q08722 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD47Q08722 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CD47Q08722 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CD47Q08722 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.05■□□□□ 0.32
CD47Q08722 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.05■□□□□ 0.32
CD47Q08722 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD47Q08722 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD47Q08722 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD47Q08722 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.04■□□□□ 0.32
CD47Q08722 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.04■□□□□ 0.32
CD47Q08722 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD47Q08722 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD47Q08722 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD47Q08722 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.04■□□□□ 0.32
CD47Q08722 AD000864.1-201ENST00000624076 2295 ntBASIC17.04■□□□□ 0.32
CD47Q08722 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD47Q08722 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD47Q08722 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD47Q08722 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CD47Q08722 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD47Q08722 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD47Q08722 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.04■□□□□ 0.32
CD47Q08722 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD47Q08722 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.04■□□□□ 0.32
CD47Q08722 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD47Q08722 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD47Q08722 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD47Q08722 FAM201B-201ENST00000458407 597 ntBASIC17.04■□□□□ 0.32
CD47Q08722 AC133681.1-201ENST00000465482 601 ntBASIC17.04■□□□□ 0.32
CD47Q08722 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.04■□□□□ 0.32
CD47Q08722 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CD47Q08722 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.04■□□□□ 0.32
CD47Q08722 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.04■□□□□ 0.32
CD47Q08722 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.04■□□□□ 0.32
CD47Q08722 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD47Q08722 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD47Q08722 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.04■□□□□ 0.32
CD47Q08722 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
CD47Q08722 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CD47Q08722 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.04■□□□□ 0.32
CD47Q08722 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD47Q08722 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CD47Q08722 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms