Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
CCL20P78556 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCL20P78556 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCL20P78556 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.47□□□□□ -0.09
CCL20P78556 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CCL20P78556 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCL20P78556 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCL20P78556 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CCL20P78556 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CCL20P78556 LINC02199-201ENST00000506655 2702 ntBASIC14.47□□□□□ -0.09
CCL20P78556 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
CCL20P78556 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.47□□□□□ -0.09
CCL20P78556 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.47□□□□□ -0.09
CCL20P78556 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL20P78556 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
CCL20P78556 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.46□□□□□ -0.09
CCL20P78556 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCL20P78556 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCL20P78556 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL20P78556 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.46□□□□□ -0.09
CCL20P78556 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL20P78556 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CCL20P78556 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.46□□□□□ -0.09
CCL20P78556 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC14.46□□□□□ -0.09
CCL20P78556 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL20P78556 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.46□□□□□ -0.09
CCL20P78556 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL20P78556 FLJ38576-201ENST00000623820 2459 ntBASIC14.46□□□□□ -0.09
CCL20P78556 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CCL20P78556 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL20P78556 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL20P78556 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.46□□□□□ -0.09
CCL20P78556 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.46□□□□□ -0.09
CCL20P78556 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CCL20P78556 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCL20P78556 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCL20P78556 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL20P78556 CROCCP2-202ENST00000412962 2773 ntBASIC14.46□□□□□ -0.09
CCL20P78556 AC068338.2-201ENST00000563278 1430 ntBASIC14.46□□□□□ -0.09
CCL20P78556 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CCL20P78556 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CCL20P78556 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.46□□□□□ -0.1
CCL20P78556 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCL20P78556 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCL20P78556 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCL20P78556 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCL20P78556 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.46□□□□□ -0.1
CCL20P78556 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCL20P78556 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCL20P78556 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCL20P78556 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.46□□□□□ -0.1
CCL20P78556 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCL20P78556 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.46□□□□□ -0.1
CCL20P78556 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCL20P78556 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL20P78556 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL20P78556 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL20P78556 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.45□□□□□ -0.1
CCL20P78556 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.45□□□□□ -0.1
CCL20P78556 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL20P78556 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL20P78556 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL20P78556 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL20P78556 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL20P78556 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL20P78556 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL20P78556 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL20P78556 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCL20P78556 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL20P78556 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL20P78556 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CCL20P78556 GPX1P1-201ENST00000388829 606 ntBASIC14.45□□□□□ -0.1
CCL20P78556 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL20P78556 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL20P78556 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CCL20P78556 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL20P78556 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.45□□□□□ -0.1
CCL20P78556 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.45□□□□□ -0.1
CCL20P78556 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CCL20P78556 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL20P78556 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.45□□□□□ -0.1
CCL20P78556 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.45□□□□□ -0.1
CCL20P78556 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL20P78556 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL20P78556 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CCL20P78556 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.45□□□□□ -0.1
CCL20P78556 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL20P78556 KRT17P1-201ENST00000399211 1546 ntBASIC14.45□□□□□ -0.1
CCL20P78556 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.45□□□□□ -0.1
CCL20P78556 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CCL20P78556 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL20P78556 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CCL20P78556 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCL20P78556 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCL20P78556 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCL20P78556 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCL20P78556 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCL20P78556 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms