Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H3AP68431 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H3AP68431 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H3AP68431 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H3AP68431 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HIST1H3AP68431 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.04■□□□□ 0.16
HIST1H3AP68431 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.04■□□□□ 0.16
HIST1H3AP68431 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.04■□□□□ 0.16
HIST1H3AP68431 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST1H3AP68431 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H3AP68431 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.04■□□□□ 0.16
HIST1H3AP68431 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H3AP68431 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST1H3AP68431 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST1H3AP68431 PHGDH-209ENST00000641074 1780 ntBASIC16.04■□□□□ 0.16
HIST1H3AP68431 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST1H3AP68431 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.04■□□□□ 0.16
HIST1H3AP68431 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H3AP68431 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HIST1H3AP68431 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H3AP68431 NOC2LP2-201ENST00000407594 1944 ntBASIC16.04■□□□□ 0.16
HIST1H3AP68431 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HIST1H3AP68431 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H3AP68431 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H3AP68431 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
HIST1H3AP68431 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HIST1H3AP68431 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H3AP68431 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H3AP68431 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.03■□□□□ 0.16
HIST1H3AP68431 AC007613.1-201ENST00000572811 2597 ntBASIC16.03■□□□□ 0.16
HIST1H3AP68431 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HIST1H3AP68431 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HIST1H3AP68431 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H3AP68431 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H3AP68431 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST1H3AP68431 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HIST1H3AP68431 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H3AP68431 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H3AP68431 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H3AP68431 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.03■□□□□ 0.16
HIST1H3AP68431 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST1H3AP68431 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H3AP68431 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.03■□□□□ 0.16
HIST1H3AP68431 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.03■□□□□ 0.16
HIST1H3AP68431 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.03■□□□□ 0.16
HIST1H3AP68431 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H3AP68431 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.03■□□□□ 0.16
HIST1H3AP68431 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H3AP68431 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H3AP68431 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.03■□□□□ 0.16
HIST1H3AP68431 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H3AP68431 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H3AP68431 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H3AP68431 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H3AP68431 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
HIST1H3AP68431 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HIST1H3AP68431 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
HIST1H3AP68431 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HIST1H3AP68431 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H3AP68431 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HIST1H3AP68431 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H3AP68431 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H3AP68431 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H3AP68431 SLC25A6P5-201ENST00000435663 894 ntBASIC16.02■□□□□ 0.16
HIST1H3AP68431 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HIST1H3AP68431 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.02■□□□□ 0.16
HIST1H3AP68431 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.02■□□□□ 0.16
HIST1H3AP68431 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.02■□□□□ 0.16
HIST1H3AP68431 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.02■□□□□ 0.16
HIST1H3AP68431 AC024243.1-201ENST00000609234 778 ntBASIC16.02■□□□□ 0.16
HIST1H3AP68431 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.02■□□□□ 0.16
HIST1H3AP68431 AL138966.2-201ENST00000621997 464 ntBASIC16.02■□□□□ 0.16
HIST1H3AP68431 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HIST1H3AP68431 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST1H3AP68431 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST1H3AP68431 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HIST1H3AP68431 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST1H3AP68431 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.02■□□□□ 0.15
HIST1H3AP68431 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
HIST1H3AP68431 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST1H3AP68431 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
HIST1H3AP68431 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HIST1H3AP68431 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.02■□□□□ 0.15
HIST1H3AP68431 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.02■□□□□ 0.15
HIST1H3AP68431 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.02■□□□□ 0.15
HIST1H3AP68431 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.02■□□□□ 0.15
HIST1H3AP68431 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H3AP68431 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.01■□□□□ 0.15
HIST1H3AP68431 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.01■□□□□ 0.15
HIST1H3AP68431 AL024508.2-201ENST00000607749 1894 ntBASIC16.01■□□□□ 0.15
HIST1H3AP68431 LINC01126-201ENST00000623515 1646 ntBASIC16.01■□□□□ 0.15
HIST1H3AP68431 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H3AP68431 AC138028.4-201ENST00000564984 1845 ntBASIC16.01■□□□□ 0.15
HIST1H3AP68431 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.01■□□□□ 0.15
HIST1H3AP68431 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HIST1H3AP68431 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H3AP68431 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H3AP68431 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H3AP68431 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HIST1H3AP68431 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms