Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PER3P56645 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PER3P56645 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PER3P56645 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PER3P56645 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.97■□□□□ 0.31
PER3P56645 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PER3P56645 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PER3P56645 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PER3P56645 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PER3P56645 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PER3P56645 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PER3P56645 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PER3P56645 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PER3P56645 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PER3P56645 FDX1P1-201ENST00000449115 551 ntBASIC16.97■□□□□ 0.31
PER3P56645 KRT17P6-201ENST00000453795 1220 ntBASIC16.97■□□□□ 0.31
PER3P56645 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.97■□□□□ 0.31
PER3P56645 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.97■□□□□ 0.31
PER3P56645 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.97■□□□□ 0.31
PER3P56645 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
PER3P56645 LINC01711-201ENST00000598340 967 ntBASIC16.97■□□□□ 0.31
PER3P56645 CR769767.2-201ENST00000622735 460 ntBASIC16.97■□□□□ 0.31
PER3P56645 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PER3P56645 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.97■□□□□ 0.31
PER3P56645 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PER3P56645 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PER3P56645 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PER3P56645 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PER3P56645 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PER3P56645 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.97■□□□□ 0.31
PER3P56645 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.96■□□□□ 0.31
PER3P56645 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PER3P56645 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PER3P56645 KRT8P10-201ENST00000450021 1447 ntBASIC16.96■□□□□ 0.31
PER3P56645 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.96■□□□□ 0.31
PER3P56645 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PER3P56645 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PER3P56645 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.96■□□□□ 0.31
PER3P56645 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.96■□□□□ 0.31
PER3P56645 AC090340.1-201ENST00000620778 4980 ntBASIC16.96■□□□□ 0.31
PER3P56645 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PER3P56645 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PER3P56645 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PER3P56645 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PER3P56645 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PER3P56645 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PER3P56645 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PER3P56645 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PER3P56645 TSSC2-201ENST00000450217 709 ntBASIC16.96■□□□□ 0.31
PER3P56645 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.96■□□□□ 0.31
PER3P56645 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.96■□□□□ 0.31
PER3P56645 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PER3P56645 GPALPP1-207ENST00000611650 899 ntBASIC16.96■□□□□ 0.31
PER3P56645 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PER3P56645 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PER3P56645 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PER3P56645 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PER3P56645 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.96■□□□□ 0.31
PER3P56645 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PER3P56645 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.96■□□□□ 0.31
PER3P56645 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PER3P56645 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.3
PER3P56645 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.96■□□□□ 0.3
PER3P56645 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
PER3P56645 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.96■□□□□ 0.3
PER3P56645 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
PER3P56645 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PER3P56645 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.96■□□□□ 0.3
PER3P56645 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PER3P56645 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PER3P56645 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PER3P56645 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.95■□□□□ 0.3
PER3P56645 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
PER3P56645 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PER3P56645 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.95■□□□□ 0.3
PER3P56645 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.95■□□□□ 0.3
PER3P56645 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.95■□□□□ 0.3
PER3P56645 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.95■□□□□ 0.3
PER3P56645 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.95■□□□□ 0.3
PER3P56645 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.95■□□□□ 0.3
PER3P56645 SPDYE15P-201ENST00000424157 909 ntBASIC16.95■□□□□ 0.3
PER3P56645 AL845331.1-201ENST00000424978 1190 ntBASIC16.95■□□□□ 0.3
PER3P56645 TSPY21P-201ENST00000433481 731 ntBASIC16.95■□□□□ 0.3
PER3P56645 TSPY23P-201ENST00000440136 739 ntBASIC16.95■□□□□ 0.3
PER3P56645 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.95■□□□□ 0.3
PER3P56645 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.95■□□□□ 0.3
PER3P56645 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
PER3P56645 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.95■□□□□ 0.3
PER3P56645 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PER3P56645 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.95■□□□□ 0.3
PER3P56645 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
PER3P56645 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
PER3P56645 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PER3P56645 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PER3P56645 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.95■□□□□ 0.3
PER3P56645 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.94■□□□□ 0.3
PER3P56645 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PER3P56645 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.94■□□□□ 0.3
PER3P56645 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PER3P56645 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms