Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.19■□□□□ 0.82
PEX3P56589 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.19■□□□□ 0.82
PEX3P56589 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.19■□□□□ 0.82
PEX3P56589 AC009113.1-201ENST00000570267 2443 ntBASIC20.19■□□□□ 0.82
PEX3P56589 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PEX3P56589 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PEX3P56589 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEX3P56589 LINC01126-201ENST00000623515 1646 ntBASIC20.19■□□□□ 0.82
PEX3P56589 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEX3P56589 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEX3P56589 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEX3P56589 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PEX3P56589 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.19■□□□□ 0.82
PEX3P56589 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PEX3P56589 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PEX3P56589 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.19■□□□□ 0.82
PEX3P56589 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.18■□□□□ 0.82
PEX3P56589 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PEX3P56589 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX3P56589 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.18■□□□□ 0.82
PEX3P56589 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PEX3P56589 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.18■□□□□ 0.82
PEX3P56589 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.18■□□□□ 0.82
PEX3P56589 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX3P56589 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX3P56589 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX3P56589 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.18■□□□□ 0.82
PEX3P56589 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.18■□□□□ 0.82
PEX3P56589 AL162741.1-201ENST00000565563 1558 ntBASIC20.18■□□□□ 0.82
PEX3P56589 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX3P56589 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX3P56589 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PEX3P56589 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX3P56589 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PEX3P56589 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.18■□□□□ 0.82
PEX3P56589 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.18■□□□□ 0.82
PEX3P56589 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PEX3P56589 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.18■□□□□ 0.82
PEX3P56589 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX3P56589 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX3P56589 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PEX3P56589 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PEX3P56589 AC090164.3-201ENST00000610780 2143 ntBASIC20.18■□□□□ 0.82
PEX3P56589 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX3P56589 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
PEX3P56589 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PEX3P56589 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX3P56589 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX3P56589 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PEX3P56589 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
PEX3P56589 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.18■□□□□ 0.82
PEX3P56589 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PEX3P56589 ESPNP-201ENST00000270691 2015 ntBASIC20.17■□□□□ 0.82
PEX3P56589 GMCL1P1-201ENST00000463439 1581 ntBASIC20.17■□□□□ 0.82
PEX3P56589 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.17■□□□□ 0.82
PEX3P56589 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PEX3P56589 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PEX3P56589 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.17■□□□□ 0.82
PEX3P56589 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PEX3P56589 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.17■□□□□ 0.82
PEX3P56589 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.17■□□□□ 0.82
PEX3P56589 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
PEX3P56589 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PEX3P56589 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.17■□□□□ 0.82
PEX3P56589 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PEX3P56589 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.17■□□□□ 0.82
PEX3P56589 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PEX3P56589 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PEX3P56589 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PEX3P56589 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PEX3P56589 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PEX3P56589 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.17■□□□□ 0.82
PEX3P56589 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PEX3P56589 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PEX3P56589 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PEX3P56589 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.16■□□□□ 0.82
PEX3P56589 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PEX3P56589 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX3P56589 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PEX3P56589 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX3P56589 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PEX3P56589 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PEX3P56589 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX3P56589 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.16■□□□□ 0.82
PEX3P56589 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX3P56589 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX3P56589 KRT18P48-201ENST00000434763 852 ntBASIC20.16■□□□□ 0.82
PEX3P56589 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.16■□□□□ 0.82
PEX3P56589 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.16■□□□□ 0.82
PEX3P56589 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.16■□□□□ 0.82
PEX3P56589 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.16■□□□□ 0.82
PEX3P56589 AC116407.4-201ENST00000623319 1061 ntBASIC20.16■□□□□ 0.82
PEX3P56589 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.16■□□□□ 0.82
PEX3P56589 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.16■□□□□ 0.82
PEX3P56589 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX3P56589 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
PEX3P56589 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX3P56589 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX3P56589 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PEX3P56589 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms