Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF144AP50876 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RNF144AP50876 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RNF144AP50876 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 MYLKP1-201ENST00000509077 1580 ntBASIC17.06■□□□□ 0.32
RNF144AP50876 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RNF144AP50876 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF144AP50876 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.06■□□□□ 0.32
RNF144AP50876 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RNF144AP50876 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF144AP50876 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF144AP50876 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF144AP50876 AC073592.3-201ENST00000625118 1834 ntBASIC17.05■□□□□ 0.32
RNF144AP50876 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF144AP50876 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF144AP50876 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RNF144AP50876 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF144AP50876 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF144AP50876 AC135776.1-201ENST00000319817 2481 ntBASIC17.05■□□□□ 0.32
RNF144AP50876 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RNF144AP50876 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF144AP50876 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF144AP50876 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
RNF144AP50876 ESPNP-201ENST00000270691 2015 ntBASIC17.05■□□□□ 0.32
RNF144AP50876 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF144AP50876 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF144AP50876 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF144AP50876 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF144AP50876 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF144AP50876 EGLN1P1-201ENST00000531623 762 ntBASIC17.05■□□□□ 0.32
RNF144AP50876 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.05■□□□□ 0.32
RNF144AP50876 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF144AP50876 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF144AP50876 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF144AP50876 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF144AP50876 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RNF144AP50876 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF144AP50876 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF144AP50876 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RNF144AP50876 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF144AP50876 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF144AP50876 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF144AP50876 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF144AP50876 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF144AP50876 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF144AP50876 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF144AP50876 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 KRT8P50-201ENST00000562022 1438 ntBASIC17.04■□□□□ 0.32
RNF144AP50876 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RNF144AP50876 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF144AP50876 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RNF144AP50876 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RNF144AP50876 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RNF144AP50876 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RNF144AP50876 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
RNF144AP50876 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF144AP50876 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF144AP50876 KRT18P23-201ENST00000435622 1283 ntBASIC17.04■□□□□ 0.32
RNF144AP50876 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF144AP50876 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF144AP50876 AC133561.5-201ENST00000635547 218 ntBASIC17.04■□□□□ 0.32
RNF144AP50876 PCDHB18P-201ENST00000524813 2368 ntBASIC17.04■□□□□ 0.32
RNF144AP50876 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF144AP50876 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF144AP50876 PKD1P1-201ENST00000458669 6805 ntBASIC17.04■□□□□ 0.32
RNF144AP50876 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RNF144AP50876 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
RNF144AP50876 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 AC112777.1-201ENST00000540175 1423 ntBASIC17.04■□□□□ 0.32
RNF144AP50876 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF144AP50876 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF144AP50876 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
RNF144AP50876 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF144AP50876 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF144AP50876 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF144AP50876 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF144AP50876 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms