Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.79■□□□□ 0.28
RFC3P40938 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
RFC3P40938 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.79■□□□□ 0.28
RFC3P40938 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC3P40938 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RFC3P40938 AC093525.10-201ENST00000625130 1569 ntBASIC16.79■□□□□ 0.28
RFC3P40938 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC3P40938 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC3P40938 NEFHP1-201ENST00000412845 2629 ntBASIC16.79■□□□□ 0.28
RFC3P40938 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC3P40938 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC3P40938 KRT8P50-201ENST00000562022 1438 ntBASIC16.79■□□□□ 0.28
RFC3P40938 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RFC3P40938 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RFC3P40938 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.78■□□□□ 0.28
RFC3P40938 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.78■□□□□ 0.28
RFC3P40938 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RFC3P40938 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
RFC3P40938 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
RFC3P40938 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RFC3P40938 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.78■□□□□ 0.28
RFC3P40938 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.78■□□□□ 0.28
RFC3P40938 AP002383.4-201ENST00000442518 975 ntBASIC16.78■□□□□ 0.28
RFC3P40938 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 KRT8P26-201ENST00000534154 1276 ntBASIC16.78■□□□□ 0.28
RFC3P40938 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.78■□□□□ 0.28
RFC3P40938 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.78■□□□□ 0.28
RFC3P40938 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.78■□□□□ 0.28
RFC3P40938 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.78■□□□□ 0.28
RFC3P40938 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
RFC3P40938 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
RFC3P40938 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.78■□□□□ 0.28
RFC3P40938 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RFC3P40938 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFC3P40938 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFC3P40938 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFC3P40938 KRT18P1-202ENST00000452408 1331 ntBASIC16.77■□□□□ 0.28
RFC3P40938 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFC3P40938 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.77■□□□□ 0.28
RFC3P40938 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RFC3P40938 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFC3P40938 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFC3P40938 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.77■□□□□ 0.28
RFC3P40938 AP000974.1-201ENST00000623909 2387 ntBASIC16.77■□□□□ 0.28
RFC3P40938 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.77■□□□□ 0.28
RFC3P40938 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFC3P40938 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFC3P40938 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFC3P40938 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.77■□□□□ 0.28
RFC3P40938 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFC3P40938 AL450487.1-201ENST00000426799 995 ntBASIC16.77■□□□□ 0.28
RFC3P40938 PVRIG2P-201ENST00000435460 978 ntBASIC16.77■□□□□ 0.28
RFC3P40938 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
RFC3P40938 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.77■□□□□ 0.28
RFC3P40938 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFC3P40938 AP003733.1-201ENST00000491725 852 ntBASIC16.77■□□□□ 0.28
RFC3P40938 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFC3P40938 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.77■□□□□ 0.28
RFC3P40938 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.77■□□□□ 0.28
RFC3P40938 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RFC3P40938 MIR3180-1-201ENST00000580374 94 ntBASIC16.77■□□□□ 0.28
RFC3P40938 MIR3180-3-201ENST00000584616 94 ntBASIC16.77■□□□□ 0.28
RFC3P40938 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RFC3P40938 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RFC3P40938 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.77■□□□□ 0.28
RFC3P40938 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.77■□□□□ 0.28
RFC3P40938 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.77■□□□□ 0.28
RFC3P40938 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFC3P40938 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFC3P40938 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFC3P40938 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.77■□□□□ 0.27
RFC3P40938 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFC3P40938 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFC3P40938 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RFC3P40938 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RFC3P40938 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms