Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCNN1AP37088 AC099343.3-201ENST00000605834 2503 ntBASIC19.07■□□□□ 0.64
SCNN1AP37088 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCNN1AP37088 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCNN1AP37088 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCNN1AP37088 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SCNN1AP37088 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCNN1AP37088 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCNN1AP37088 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCNN1AP37088 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCNN1AP37088 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SCNN1AP37088 FLJ13224-201ENST00000313737 1514 ntBASIC19.06■□□□□ 0.64
SCNN1AP37088 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCNN1AP37088 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCNN1AP37088 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCNN1AP37088 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCNN1AP37088 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCNN1AP37088 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCNN1AP37088 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.06■□□□□ 0.64
SCNN1AP37088 DUTP2-201ENST00000519164 463 ntBASIC19.06■□□□□ 0.64
SCNN1AP37088 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.06■□□□□ 0.64
SCNN1AP37088 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.06■□□□□ 0.64
SCNN1AP37088 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.06■□□□□ 0.64
SCNN1AP37088 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCNN1AP37088 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCNN1AP37088 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCNN1AP37088 LINC01311-201ENST00000565162 1445 ntBASIC19.06■□□□□ 0.64
SCNN1AP37088 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCNN1AP37088 AIRN-201ENST00000601203 4374 ntBASIC19.06■□□□□ 0.64
SCNN1AP37088 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.06■□□□□ 0.64
SCNN1AP37088 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCNN1AP37088 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SCNN1AP37088 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCNN1AP37088 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCNN1AP37088 NEFHP1-201ENST00000412845 2629 ntBASIC19.05■□□□□ 0.64
SCNN1AP37088 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.05■□□□□ 0.64
SCNN1AP37088 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SCNN1AP37088 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCNN1AP37088 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.05■□□□□ 0.64
SCNN1AP37088 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SCNN1AP37088 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.05■□□□□ 0.64
SCNN1AP37088 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.05■□□□□ 0.64
SCNN1AP37088 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCNN1AP37088 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCNN1AP37088 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCNN1AP37088 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCNN1AP37088 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCNN1AP37088 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.05■□□□□ 0.64
SCNN1AP37088 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCNN1AP37088 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCNN1AP37088 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCNN1AP37088 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCNN1AP37088 KRT18P48-201ENST00000434763 852 ntBASIC19.05■□□□□ 0.64
SCNN1AP37088 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.05■□□□□ 0.64
SCNN1AP37088 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.05■□□□□ 0.64
SCNN1AP37088 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.05■□□□□ 0.64
SCNN1AP37088 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.05■□□□□ 0.64
SCNN1AP37088 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.05■□□□□ 0.64
SCNN1AP37088 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.05■□□□□ 0.64
SCNN1AP37088 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.05■□□□□ 0.64
SCNN1AP37088 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SCNN1AP37088 AC083849.1-201ENST00000615227 514 ntBASIC19.05■□□□□ 0.64
SCNN1AP37088 LINC00167-201ENST00000530583 1419 ntBASIC19.05■□□□□ 0.64
SCNN1AP37088 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCNN1AP37088 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCNN1AP37088 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SCNN1AP37088 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCNN1AP37088 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCNN1AP37088 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SCNN1AP37088 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCNN1AP37088 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCNN1AP37088 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.04■□□□□ 0.64
SCNN1AP37088 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.04■□□□□ 0.64
SCNN1AP37088 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SCNN1AP37088 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCNN1AP37088 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SCNN1AP37088 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCNN1AP37088 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCNN1AP37088 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SCNN1AP37088 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.04■□□□□ 0.64
SCNN1AP37088 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.04■□□□□ 0.64
SCNN1AP37088 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SCNN1AP37088 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SCNN1AP37088 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SCNN1AP37088 AL671277.2-201ENST00000458060 996 ntBASIC19.04■□□□□ 0.64
SCNN1AP37088 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
SCNN1AP37088 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SCNN1AP37088 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SCNN1AP37088 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCNN1AP37088 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCNN1AP37088 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCNN1AP37088 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SCNN1AP37088 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCNN1AP37088 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.04■□□□□ 0.64
SCNN1AP37088 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SCNN1AP37088 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.03■□□□□ 0.64
SCNN1AP37088 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCNN1AP37088 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCNN1AP37088 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SCNN1AP37088 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms