Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.43■□□□□ 0.38
RORAP35398 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RORAP35398 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RORAP35398 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.43■□□□□ 0.38
RORAP35398 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.43■□□□□ 0.38
RORAP35398 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RORAP35398 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.43■□□□□ 0.38
RORAP35398 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.43■□□□□ 0.38
RORAP35398 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RORAP35398 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RORAP35398 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
RORAP35398 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RORAP35398 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.42■□□□□ 0.38
RORAP35398 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.42■□□□□ 0.38
RORAP35398 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.42■□□□□ 0.38
RORAP35398 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RORAP35398 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RORAP35398 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RORAP35398 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.42■□□□□ 0.38
RORAP35398 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RORAP35398 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.42■□□□□ 0.38
RORAP35398 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RORAP35398 AP000593.1-201ENST00000393668 712 ntBASIC17.42■□□□□ 0.38
RORAP35398 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.42■□□□□ 0.38
RORAP35398 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RORAP35398 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RORAP35398 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.42■□□□□ 0.38
RORAP35398 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RORAP35398 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RORAP35398 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RORAP35398 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RORAP35398 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RORAP35398 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RORAP35398 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RORAP35398 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RORAP35398 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RORAP35398 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RORAP35398 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.42■□□□□ 0.38
RORAP35398 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RORAP35398 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RORAP35398 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RORAP35398 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.41■□□□□ 0.38
RORAP35398 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RORAP35398 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.41■□□□□ 0.38
RORAP35398 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.41■□□□□ 0.38
RORAP35398 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RORAP35398 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RORAP35398 BCL2-203ENST00000589955 5011 ntBASIC17.41■□□□□ 0.38
RORAP35398 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RORAP35398 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RORAP35398 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RORAP35398 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RORAP35398 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RORAP35398 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RORAP35398 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.41■□□□□ 0.38
RORAP35398 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RORAP35398 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RORAP35398 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.41■□□□□ 0.38
RORAP35398 DRAXINP1-201ENST00000437611 948 ntBASIC17.41■□□□□ 0.38
RORAP35398 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.41■□□□□ 0.38
RORAP35398 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.41■□□□□ 0.38
RORAP35398 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.41■□□□□ 0.38
RORAP35398 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RORAP35398 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.41■□□□□ 0.38
RORAP35398 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RORAP35398 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.41■□□□□ 0.38
RORAP35398 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.41■□□□□ 0.38
RORAP35398 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.41■□□□□ 0.38
RORAP35398 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.41■□□□□ 0.38
RORAP35398 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RORAP35398 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RORAP35398 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.41■□□□□ 0.38
RORAP35398 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RORAP35398 KRT18P1-202ENST00000452408 1331 ntBASIC17.41■□□□□ 0.38
RORAP35398 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RORAP35398 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.41■□□□□ 0.38
RORAP35398 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RORAP35398 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RORAP35398 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.4■□□□□ 0.38
RORAP35398 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RORAP35398 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.4■□□□□ 0.38
RORAP35398 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.4■□□□□ 0.38
RORAP35398 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
RORAP35398 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RORAP35398 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RORAP35398 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RORAP35398 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RORAP35398 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RORAP35398 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.4■□□□□ 0.38
RORAP35398 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.4■□□□□ 0.38
RORAP35398 TPSP2-201ENST00000561760 610 ntBASIC17.4■□□□□ 0.38
RORAP35398 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RORAP35398 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.4■□□□□ 0.38
RORAP35398 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.4■□□□□ 0.38
RORAP35398 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RORAP35398 AC024563.2-201ENST00000603282 481 ntBASIC17.4■□□□□ 0.38
RORAP35398 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RORAP35398 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RORAP35398 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RORAP35398 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms