Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPA3P35244 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPA3P35244 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPA3P35244 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RPA3P35244 AC004951.3-201ENST00000418645 1148 ntBASIC18.57■□□□□ 0.56
RPA3P35244 TSPY7P-201ENST00000431358 1114 ntBASIC18.57■□□□□ 0.56
RPA3P35244 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPA3P35244 NUDT16P1-203ENST00000513809 620 ntBASIC18.57■□□□□ 0.56
RPA3P35244 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPA3P35244 MIR4785-201ENST00000585005 73 ntBASIC18.57■□□□□ 0.56
RPA3P35244 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPA3P35244 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPA3P35244 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPA3P35244 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPA3P35244 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPA3P35244 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.57■□□□□ 0.56
RPA3P35244 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPA3P35244 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.57■□□□□ 0.56
RPA3P35244 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RPA3P35244 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPA3P35244 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPA3P35244 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPA3P35244 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPA3P35244 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RPA3P35244 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPA3P35244 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.56■□□□□ 0.56
RPA3P35244 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RPA3P35244 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPA3P35244 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RPA3P35244 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPA3P35244 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPA3P35244 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.56■□□□□ 0.56
RPA3P35244 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.56■□□□□ 0.56
RPA3P35244 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.56■□□□□ 0.56
RPA3P35244 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RPA3P35244 MIR6786-201ENST00000616843 113 ntBASIC18.56■□□□□ 0.56
RPA3P35244 AC011298.2-201ENST00000617989 482 ntBASIC18.56■□□□□ 0.56
RPA3P35244 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.56■□□□□ 0.56
RPA3P35244 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.56■□□□□ 0.56
RPA3P35244 FSCN1P1-201ENST00000568912 1481 ntBASIC18.56■□□□□ 0.56
RPA3P35244 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RPA3P35244 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPA3P35244 HCG11-201ENST00000411553 5696 ntBASIC18.56■□□□□ 0.56
RPA3P35244 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.56■□□□□ 0.56
RPA3P35244 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RPA3P35244 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.56■□□□□ 0.56
RPA3P35244 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.56■□□□□ 0.56
RPA3P35244 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.56■□□□□ 0.56
RPA3P35244 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.56■□□□□ 0.56
RPA3P35244 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPA3P35244 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPA3P35244 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPA3P35244 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPA3P35244 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RPA3P35244 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.55■□□□□ 0.56
RPA3P35244 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RPA3P35244 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RPA3P35244 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RPA3P35244 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
RPA3P35244 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.55■□□□□ 0.56
RPA3P35244 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.55■□□□□ 0.56
RPA3P35244 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.55■□□□□ 0.56
RPA3P35244 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.55■□□□□ 0.56
RPA3P35244 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.55■□□□□ 0.56
RPA3P35244 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.55■□□□□ 0.56
RPA3P35244 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.55■□□□□ 0.56
RPA3P35244 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
RPA3P35244 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.55■□□□□ 0.56
RPA3P35244 PCDHA12-202ENST00000613593 2588 ntBASIC18.55■□□□□ 0.56
RPA3P35244 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPA3P35244 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
RPA3P35244 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPA3P35244 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.55■□□□□ 0.56
RPA3P35244 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RPA3P35244 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.55■□□□□ 0.56
RPA3P35244 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPA3P35244 AC012317.2-201ENST00000623305 2251 ntBASIC18.54■□□□□ 0.56
RPA3P35244 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPA3P35244 AL645608.8-201ENST00000606034 2086 ntBASIC18.54■□□□□ 0.56
RPA3P35244 KRT17P2-201ENST00000300992 1314 ntBASIC18.54■□□□□ 0.56
RPA3P35244 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPA3P35244 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPA3P35244 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RPA3P35244 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RPA3P35244 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.54■□□□□ 0.56
RPA3P35244 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.54■□□□□ 0.56
RPA3P35244 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPA3P35244 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.54■□□□□ 0.56
RPA3P35244 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPA3P35244 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.54■□□□□ 0.56
RPA3P35244 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.54■□□□□ 0.56
RPA3P35244 MIR4497-201ENST00000583208 89 ntBASIC18.54■□□□□ 0.56
RPA3P35244 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RPA3P35244 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPA3P35244 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPA3P35244 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RPA3P35244 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.54■□□□□ 0.56
RPA3P35244 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPA3P35244 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RPA3P35244 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms