Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC22.42■■□□□ 1.18
KCNA3P22001 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC22.42■■□□□ 1.18
KCNA3P22001 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC22.42■■□□□ 1.18
KCNA3P22001 SNHG9-202ENST00000564014 471 ntBASIC22.42■■□□□ 1.18
KCNA3P22001 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC22.42■■□□□ 1.18
KCNA3P22001 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC22.42■■□□□ 1.18
KCNA3P22001 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
KCNA3P22001 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.42■■□□□ 1.18
KCNA3P22001 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
KCNA3P22001 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22.42■■□□□ 1.18
KCNA3P22001 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
KCNA3P22001 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
KCNA3P22001 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
KCNA3P22001 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
KCNA3P22001 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
KCNA3P22001 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
KCNA3P22001 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC22.41■■□□□ 1.18
KCNA3P22001 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
KCNA3P22001 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
KCNA3P22001 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
KCNA3P22001 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
KCNA3P22001 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC22.41■■□□□ 1.18
KCNA3P22001 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC22.41■■□□□ 1.18
KCNA3P22001 AC008687.5-201ENST00000593746 558 ntBASIC22.41■■□□□ 1.18
KCNA3P22001 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC22.41■■□□□ 1.18
KCNA3P22001 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC22.41■■□□□ 1.18
KCNA3P22001 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.41■■□□□ 1.18
KCNA3P22001 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC22.41■■□□□ 1.18
KCNA3P22001 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC22.41■■□□□ 1.18
KCNA3P22001 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
KCNA3P22001 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.41■■□□□ 1.18
KCNA3P22001 AL024508.2-201ENST00000607749 1894 ntBASIC22.41■■□□□ 1.18
KCNA3P22001 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.41■■□□□ 1.18
KCNA3P22001 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
KCNA3P22001 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KCNA3P22001 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
KCNA3P22001 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KCNA3P22001 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC22.4■■□□□ 1.18
KCNA3P22001 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
KCNA3P22001 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.4■■□□□ 1.18
KCNA3P22001 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
KCNA3P22001 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KCNA3P22001 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KCNA3P22001 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
KCNA3P22001 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
KCNA3P22001 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC22.4■■□□□ 1.18
KCNA3P22001 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC22.4■■□□□ 1.18
KCNA3P22001 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC22.4■■□□□ 1.18
KCNA3P22001 AC092865.6-201ENST00000642101 219 ntBASIC22.4■■□□□ 1.18
KCNA3P22001 AC099343.3-201ENST00000605834 2503 ntBASIC22.4■■□□□ 1.18
KCNA3P22001 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC22.4■■□□□ 1.18
KCNA3P22001 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
KCNA3P22001 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.4■■□□□ 1.18
KCNA3P22001 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC22.4■■□□□ 1.18
KCNA3P22001 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KCNA3P22001 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
KCNA3P22001 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
KCNA3P22001 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
KCNA3P22001 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
KCNA3P22001 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
KCNA3P22001 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
KCNA3P22001 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC22.39■■□□□ 1.17
KCNA3P22001 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KCNA3P22001 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC22.39■■□□□ 1.17
KCNA3P22001 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
KCNA3P22001 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC22.39■■□□□ 1.17
KCNA3P22001 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.39■■□□□ 1.17
KCNA3P22001 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
KCNA3P22001 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC22.39■■□□□ 1.17
KCNA3P22001 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC22.39■■□□□ 1.17
KCNA3P22001 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KCNA3P22001 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC22.39■■□□□ 1.17
KCNA3P22001 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
KCNA3P22001 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNA3P22001 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
KCNA3P22001 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNA3P22001 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC22.38■■□□□ 1.17
KCNA3P22001 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC22.38■■□□□ 1.17
KCNA3P22001 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNA3P22001 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC22.38■■□□□ 1.17
KCNA3P22001 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
KCNA3P22001 ORC5-208ENST00000626700 344 ntTSL 3 BASIC22.38■■□□□ 1.17
KCNA3P22001 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
KCNA3P22001 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
KCNA3P22001 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC22.38■■□□□ 1.17
KCNA3P22001 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC22.38■■□□□ 1.17
KCNA3P22001 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC22.38■■□□□ 1.17
KCNA3P22001 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
KCNA3P22001 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC22.38■■□□□ 1.17
KCNA3P22001 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
KCNA3P22001 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
KCNA3P22001 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
KCNA3P22001 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
KCNA3P22001 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
KCNA3P22001 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
KCNA3P22001 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
KCNA3P22001 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22.37■■□□□ 1.17
KCNA3P22001 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC22.37■■□□□ 1.17
KCNA3P22001 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC22.37■■□□□ 1.17
KCNA3P22001 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms